RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 ZNF189O75820 626 aaPredicted RBP13.94□□□□□ -0.18
VTI1A-209ENST00000496445 TIAF1O95411 115 aa13.94□□□□□ -0.18
VTI1A-209ENST00000496445 FGF5P12034 268 aa13.94□□□□□ -0.18
VTI1A-209ENST00000496445 NELFEP18615 380 aaKnown RBP13.94□□□□□ -0.18
VTI1A-209ENST00000496445 ITGALP20701 1170 aa13.94□□□□□ -0.18
VTI1A-209ENST00000496445 F8A1P23610 371 aa13.94□□□□□ -0.18
VTI1A-209ENST00000496445 HADHAP40939 763 aa13.94□□□□□ -0.18
VTI1A-209ENST00000496445 NFKB2Q00653 900 aa13.94□□□□□ -0.18
VTI1A-209ENST00000496445 PLCL1Q15111 1095 aa13.94□□□□□ -0.18
VTI1A-209ENST00000496445 PARP6Q2NL67 630 aa13.94□□□□□ -0.18
VTI1A-209ENST00000496445 ZNF658BQ4V348 819 aaPredicted RBP13.94□□□□□ -0.18
VTI1A-209ENST00000496445 BORAQ6PGQ7 559 aa13.94□□□□□ -0.18
VTI1A-209ENST00000496445 CERS6Q6ZMG9 384 aa13.94□□□□□ -0.18
VTI1A-209ENST00000496445 ELMO2Q96JJ3 720 aa13.94□□□□□ -0.18
VTI1A-209ENST00000496445 TRIT1Q9H3H1 467 aaKnown RBP13.94□□□□□ -0.18
VTI1A-209ENST00000496445 LRRC40Q9H9A6 602 aa13.94□□□□□ -0.18
VTI1A-209ENST00000496445 PIH1D1Q9NWS0 290 aaKnown RBP13.94□□□□□ -0.18
VTI1A-209ENST00000496445 SLC24A2Q9UI40 661 aa13.94□□□□□ -0.18
VTI1A-209ENST00000496445 ACSL5Q9ULC5 683 aa13.94□□□□□ -0.18
VTI1A-209ENST00000496445 MRPS18BQ9Y676 258 aaKnown RBP13.94□□□□□ -0.18
VTI1A-209ENST00000496445 PYCARD-AS1I3L0S3 204 aa13.93□□□□□ -0.18
VTI1A-209ENST00000496445 J3QKU1 62 aa13.93□□□□□ -0.18
VTI1A-209ENST00000496445 TERTO14746 1132 aaKnown RBP13.93□□□□□ -0.18
VTI1A-209ENST00000496445 KIAA0754O94854 1291 aa13.93□□□□□ -0.18
VTI1A-209ENST00000496445 AP2A1O95782 977 aa13.93□□□□□ -0.18
VTI1A-209ENST00000496445 PTMAP06454 111 aaKnown RBP13.93□□□□□ -0.18
VTI1A-209ENST00000496445 TPH1P17752 444 aa13.93□□□□□ -0.18
VTI1A-209ENST00000496445 ACRV1P26436 265 aa13.93□□□□□ -0.18
VTI1A-209ENST00000496445 OAS2P29728 719 aaKnown RBP13.93□□□□□ -0.18
VTI1A-209ENST00000496445 POLE2P56282 527 aa13.93□□□□□ -0.18
VTI1A-209ENST00000496445 CDC20Q12834 499 aa13.93□□□□□ -0.18
VTI1A-209ENST00000496445 IL11RAQ14626 422 aa13.93□□□□□ -0.18
VTI1A-209ENST00000496445 KCNAB1Q14722 419 aa13.93□□□□□ -0.18
VTI1A-209ENST00000496445 POU6F1Q14863 301 aa13.93□□□□□ -0.18
VTI1A-209ENST00000496445 ATP1A1-AS1Q5TC04 95 aa13.93□□□□□ -0.18
VTI1A-209ENST00000496445 CAPRIN2Q6IMN6 1127 aaKnown RBP13.93□□□□□ -0.18
VTI1A-209ENST00000496445 RASGRP3Q8IV61 690 aa13.93□□□□□ -0.18
VTI1A-209ENST00000496445 TAB3Q8N5C8 712 aaPredicted RBP13.93□□□□□ -0.18
VTI1A-209ENST00000496445 ESX1Q8N693 406 aa13.93□□□□□ -0.18
VTI1A-209ENST00000496445 GALNT6Q8NCL4 622 aa13.93□□□□□ -0.18
VTI1A-209ENST00000496445 HM13Q8TCT9 377 aa13.93□□□□□ -0.18
VTI1A-209ENST00000496445 ATG4AQ8WYN0 398 aa13.93□□□□□ -0.18
VTI1A-209ENST00000496445 STARD8Q92502 1023 aa13.93□□□□□ -0.18
VTI1A-209ENST00000496445 KIAA1143Q96AT1 154 aaPredicted RBP13.93□□□□□ -0.18
VTI1A-209ENST00000496445 DCUN1D1Q96GG9 259 aa13.93□□□□□ -0.18
VTI1A-209ENST00000496445 COPS8Q99627 209 aa13.93□□□□□ -0.18
VTI1A-209ENST00000496445 MAP3K3Q99759 626 aa13.93□□□□□ -0.18
VTI1A-209ENST00000496445 KIR3DX1Q9H7L2 352 aa13.93□□□□□ -0.18
VTI1A-209ENST00000496445 NLE1Q9NVX2 485 aaPredicted RBP13.93□□□□□ -0.18
VTI1A-209ENST00000496445 GEMIN8Q9NWZ8 242 aaKnown RBP13.93□□□□□ -0.18
VTI1A-209ENST00000496445 RPS6KL1Q9Y6S9 549 aa13.93□□□□□ -0.18
VTI1A-209ENST00000496445 KLHL33A6NCF5 533 aa13.92□□□□□ -0.18
VTI1A-209ENST00000496445 TLCD2A6NGC4 264 aa13.92□□□□□ -0.18
VTI1A-209ENST00000496445 SLC28A2O43868 658 aa13.92□□□□□ -0.18
VTI1A-209ENST00000496445 SPAG6O75602 509 aa13.92□□□□□ -0.18
VTI1A-209ENST00000496445 SLC35G4P0C7Q5 338 aa13.92□□□□□ -0.18
VTI1A-209ENST00000496445 EBLN1P0CF75 366 aa13.92□□□□□ -0.18
VTI1A-209ENST00000496445 PRKAR1AP10644 381 aa13.92□□□□□ -0.18
VTI1A-209ENST00000496445 RALBP11234 206 aa13.92□□□□□ -0.18
VTI1A-209ENST00000496445 ATP1B2P14415 290 aaPredicted RBP13.92□□□□□ -0.18
VTI1A-209ENST00000496445 FOLR1P15328 257 aa13.92□□□□□ -0.18
VTI1A-209ENST00000496445 TUBB3Q13509 450 aa13.92□□□□□ -0.18
VTI1A-209ENST00000496445 SEPT6Q14141 434 aa13.92□□□□□ -0.18
VTI1A-209ENST00000496445 OASLQ15646 514 aaKnown RBP13.92□□□□□ -0.18
VTI1A-209ENST00000496445 P3H1Q32P28 736 aa13.92□□□□□ -0.18
VTI1A-209ENST00000496445 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.92□□□□□ -0.18
VTI1A-209ENST00000496445 ZRANB3Q5FWF4 1079 aa13.92□□□□□ -0.18
VTI1A-209ENST00000496445 C6orf15Q6UXA7 325 aaPredicted RBP13.92□□□□□ -0.18
VTI1A-209ENST00000496445 SERPINA9Q86WD7 417 aa13.92□□□□□ -0.18
VTI1A-209ENST00000496445 PIANPQ8IYJ0 282 aa13.92□□□□□ -0.18
VTI1A-209ENST00000496445 CFAP206Q8IYR0 622 aa13.92□□□□□ -0.18
VTI1A-209ENST00000496445 TXLNBQ8N3L3 684 aa13.92□□□□□ -0.18
VTI1A-209ENST00000496445 UBXN4Q92575 508 aa13.92□□□□□ -0.18
VTI1A-209ENST00000496445 PPM1MQ96MI6 270 aa13.92□□□□□ -0.18
VTI1A-209ENST00000496445 EFHD1Q9BUP0 239 aa13.92□□□□□ -0.18
VTI1A-209ENST00000496445 OR52A5Q9H2C5 316 aa13.92□□□□□ -0.18
VTI1A-209ENST00000496445 COG4Q9H9E3 785 aa13.92□□□□□ -0.18
VTI1A-209ENST00000496445 ZDHHC3Q9NYG2 299 aa13.92□□□□□ -0.18
VTI1A-209ENST00000496445 CROTQ9UKG9 612 aa13.92□□□□□ -0.18
VTI1A-209ENST00000496445 FLNCQ14315 2725 aa13.91□□□□□ -0.18
VTI1A-209ENST00000496445 CCDC78A2IDD5 438 aa13.91□□□□□ -0.18
VTI1A-209ENST00000496445 CFAP99D6REC4 459 aa13.91□□□□□ -0.18
VTI1A-209ENST00000496445 POLBP06746 335 aa13.91□□□□□ -0.18
VTI1A-209ENST00000496445 PSMA3P25788 255 aa13.91□□□□□ -0.18
VTI1A-209ENST00000496445 DLSTP36957 453 aa13.91□□□□□ -0.18
VTI1A-209ENST00000496445 ARCN1P48444 511 aaKnown RBP13.91□□□□□ -0.18
VTI1A-209ENST00000496445 KPNA2P52292 529 aaKnown RBP13.91□□□□□ -0.18
VTI1A-209ENST00000496445 DBN1Q16643 649 aa13.91□□□□□ -0.18
VTI1A-209ENST00000496445 GPR33Q49SQ1 333 aa13.91□□□□□ -0.18
VTI1A-209ENST00000496445 DNTTIP2Q5QJE6 756 aaKnown RBP13.91□□□□□ -0.18
VTI1A-209ENST00000496445 KLHL35Q6PF15 583 aa13.91□□□□□ -0.18
VTI1A-209ENST00000496445 PRICKLE2Q7Z3G6 844 aa13.91□□□□□ -0.18
VTI1A-209ENST00000496445 OOSP2Q86WS3 158 aa13.91□□□□□ -0.18
VTI1A-209ENST00000496445 PPP1R3BQ86XI6 285 aa13.91□□□□□ -0.18
VTI1A-209ENST00000496445 RNF10Q8N5U6 811 aaKnown RBP13.91□□□□□ -0.18
VTI1A-209ENST00000496445 SIDT2Q8NBJ9 832 aaKnown RBP13.91□□□□□ -0.18
VTI1A-209ENST00000496445 HEXDCQ8WVB3 486 aa13.91□□□□□ -0.18
VTI1A-209ENST00000496445 ZFPM2Q8WW38 1151 aa13.91□□□□□ -0.18
VTI1A-209ENST00000496445 LRRC45Q96CN5 670 aa13.91□□□□□ -0.18
VTI1A-209ENST00000496445 STAMBPL1Q96FJ0 436 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms