RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 SPACA3Q8IXA5 215 aa17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 AGGF1Q8N302 714 aaeCLIP17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 AVL9Q8NBF6 648 aa17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 USP7Q93009 1102 aa17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 TGM7Q96PF1 710 aa17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 CMKLR1Q99788 373 aa17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 CCM2Q9BSQ5 444 aa17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 IL22Q9GZX6 179 aa17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 UCK1Q9HA47 277 aa17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 IL1RAPL1Q9NZN1 696 aa17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 MN1Q10571 1320 aaPredicted RBP17.17■□□□□ 0.34
RHBDD3-207ENST00000496342 EFCAB7A8K855 629 aa17.16■□□□□ 0.34
RHBDD3-207ENST00000496342 C9orf172C9J069 976 aa17.16■□□□□ 0.34
RHBDD3-207ENST00000496342 KIF1CO43896 1103 aaKnown RBP17.16■□□□□ 0.34
RHBDD3-207ENST00000496342 FGF3P11487 239 aaPredicted RBP17.16■□□□□ 0.34
RHBDD3-207ENST00000496342 AMD1P17707 334 aa17.16■□□□□ 0.34
RHBDD3-207ENST00000496342 NSG1P42857 185 aa17.16■□□□□ 0.34
RHBDD3-207ENST00000496342 ABCG1P45844 678 aa17.16■□□□□ 0.34
RHBDD3-207ENST00000496342 NPY2RP49146 381 aa17.16■□□□□ 0.34
RHBDD3-207ENST00000496342 CSE1LP55060 971 aaKnown RBP17.16■□□□□ 0.34
RHBDD3-207ENST00000496342 FASTKD1Q53R41 847 aaKnown RBP17.16■□□□□ 0.34
RHBDD3-207ENST00000496342 PAPD7Q5XG87 772 aaKnown RBP17.16■□□□□ 0.34
RHBDD3-207ENST00000496342 WDR74Q6RFH5 385 aaPredicted RBP17.16■□□□□ 0.34
RHBDD3-207ENST00000496342 PACS1Q6VY07 963 aa17.16■□□□□ 0.34
RHBDD3-207ENST00000496342 FAM129CQ86XR2 697 aa17.16■□□□□ 0.34
RHBDD3-207ENST00000496342 CREG2Q8IUH2 290 aa17.16■□□□□ 0.34
RHBDD3-207ENST00000496342 KLHL7Q8IXQ5 586 aa17.16■□□□□ 0.34
RHBDD3-207ENST00000496342 HEXDCQ8WVB3 486 aa17.16■□□□□ 0.34
RHBDD3-207ENST00000496342 KCNE4Q8WWG9 221 aa17.16■□□□□ 0.34
RHBDD3-207ENST00000496342 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.16■□□□□ 0.34
RHBDD3-207ENST00000496342 OR52A5Q9H2C5 316 aa17.16■□□□□ 0.34
RHBDD3-207ENST00000496342 CATSPERZQ9NTU4 200 aa17.16■□□□□ 0.34
RHBDD3-207ENST00000496342 WDR70Q9NW82 654 aa17.16■□□□□ 0.34
RHBDD3-207ENST00000496342 SOX13Q9UN79 622 aa17.16■□□□□ 0.34
RHBDD3-207ENST00000496342 IQCF5A8MTL0 148 aa17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 HGSO14964 777 aaPredicted RBP17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 CAPN5O15484 640 aaPredicted RBP17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 PTGIRP43119 386 aa17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 CAPZBP47756 277 aa17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 ARCN1P48444 511 aaKnown RBP17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 SRSF6Q13247 344 aaKnown RBP17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 LAMB3Q13751 1172 aa17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 BOP1Q14137 746 aaKnown RBP17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 PLCL1Q15111 1095 aa17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 TGIF1Q15583 401 aa17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 CAPRIN2Q6IMN6 1127 aaKnown RBP17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 LRRC69Q6ZNQ3 347 aa17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 FAM92BQ6ZTR7 304 aa17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 NLRP9Q7RTR0 991 aa17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 ZFAND4Q86XD8 727 aa17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 KRT222Q8N1A0 295 aa17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 ZNF248Q8NDW4 579 aa17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 ELMO1Q92556 727 aa17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 ART4Q93070 314 aa17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 SERPINB12Q96P63 405 aa17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 KIFC1Q9BW19 673 aa17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 PDP2Q9P2J9 529 aa17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 ACSL5Q9ULC5 683 aa17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 LHX6Q9UPM6 363 aa17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 PTPRQQ9UMZ3 2332 aa17.15■□□□□ 0.34
RHBDD3-207ENST00000496342 CD3EAPO15446 510 aaKnown RBP17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 RRP8O43159 456 aaKnown RBP17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 KLK10O43240 276 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 BANF1O75531 89 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 AP2A2O94973 939 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 VAPBO95292 243 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 CSTF2P33240 577 aaKnown RBP eCLIP17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 SEPHS1P49903 392 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 CDK16Q00536 496 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 TLE3Q04726 772 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 TRA2AQ13595 282 aaKnown RBP eCLIP17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 PPP1R7Q15435 360 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 IRGCQ6NXR0 463 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 CASC4Q6P4E1 433 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 ARHGAP22Q7Z5H3 698 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 SPNS2Q8IVW8 549 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 OTUD6BQ8N6M0 293 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 NAT8LQ8N9F0 302 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 AGBL5Q8NDL9 886 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 PHC3Q8NDX5 983 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 GRK7Q8WTQ7 553 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 CTRCQ99895 268 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 DPYSL5Q9BPU6 564 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 TRIM51Q9BSJ1 452 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 APMAPQ9HDC9 416 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 ASIC3Q9UHC3 531 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 SLC24A2Q9UI40 661 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 SAR1BQ9Y6B6 198 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 ZFHX4Q86UP3 3567 aa17.14■□□□□ 0.33
RHBDD3-207ENST00000496342 C17orf113A0A1B0GUU1 675 aa17.13■□□□□ 0.33
RHBDD3-207ENST00000496342 CTAGE9A4FU28 777 aa17.13■□□□□ 0.33
RHBDD3-207ENST00000496342 C9P02748 559 aa17.13■□□□□ 0.33
RHBDD3-207ENST00000496342 CLN3Q13286 438 aa17.13■□□□□ 0.33
RHBDD3-207ENST00000496342 PTK6Q13882 451 aa17.13■□□□□ 0.33
RHBDD3-207ENST00000496342 RNASEH2BQ5TBB1 312 aaKnown RBP17.13■□□□□ 0.33
RHBDD3-207ENST00000496342 ANKS6Q68DC2 871 aa17.13■□□□□ 0.33
RHBDD3-207ENST00000496342 BMPERQ8N8U9 685 aa17.13■□□□□ 0.33
RHBDD3-207ENST00000496342 PEX13Q92968 403 aa17.13■□□□□ 0.33
RHBDD3-207ENST00000496342 TMEM159Q96B96 161 aa17.13■□□□□ 0.33
RHBDD3-207ENST00000496342 ZNF669Q96BR6 464 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms