RNA–Protein interactions for RNA: ENST00000494977.1

FGD4-208, Transcript of FYVE, RhoGEF and PH domain containing 4, human

TSL 2

Gene FGD4, Length 2,349 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGD4-208	ENST00000494977	C8orf37	Q96NL8	207 aa		6.24	□□□□□ -1.41
FGD4-208	ENST00000494977	FAM129B	Q96TA1	746 aa		6.24	□□□□□ -1.41
FGD4-208	ENST00000494977	ZNF577	Q9BSK1	485 aa		6.24	□□□□□ -1.41
FGD4-208	ENST00000494977	GSX2	Q9BZM3	304 aa		6.24	□□□□□ -1.41
FGD4-208	ENST00000494977	SOX17	Q9H6I2	414 aa	Predicted RBP	6.24	□□□□□ -1.41
FGD4-208	ENST00000494977	NIT2	Q9NQR4	276 aa		6.24	□□□□□ -1.41
FGD4-208	ENST00000494977	KCNQ5	Q9NR82	932 aa		6.24	□□□□□ -1.41
FGD4-208	ENST00000494977	RAB20	Q9NX57	234 aa		6.24	□□□□□ -1.41
FGD4-208	ENST00000494977	THUMPD1	Q9NXG2	353 aa	Known RBP	6.24	□□□□□ -1.41
FGD4-208	ENST00000494977	VTI1B	Q9UEU0	232 aa		6.24	□□□□□ -1.41
FGD4-208	ENST00000494977	INTS6	Q9UL03	887 aa	Known RBP	6.24	□□□□□ -1.41
FGD4-208	ENST00000494977	CDYL	Q9Y232	598 aa		6.24	□□□□□ -1.41
FGD4-208	ENST00000494977	MED16	Q9Y2X0	877 aa		6.24	□□□□□ -1.41
FGD4-208	ENST00000494977	MAB21L2	Q9Y586	359 aa		6.24	□□□□□ -1.41
FGD4-208	ENST00000494977	CNTNAP2	Q9UHC6	1331 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	ZNF729	A6NN14	1252 aa	Predicted RBP	6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	MPTX1	A8MV57	137 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	KPNA7	A9QM74	516 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	WWP2	O00308	870 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	SLC1A7	O00341	560 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	PIK3R2	O00459	728 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	MRPS14	O60783	128 aa	Known RBP	6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	SLITRK3	O94933	977 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	OAZ2	O95190	189 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	PAPSS2	O95340	614 aa	Predicted RBP	6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	FCER2	P06734	321 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	HLA-E	P13747	358 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	CD36	P16671	472 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	TFE3	P19532	575 aa	Predicted RBP	6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	OGN	P20774	298 aa	Known RBP	6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	PBLD	P30039	288 aa	Predicted RBP	6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	ADORA1	P30542	326 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	RFC2	P35250	354 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	RORA	P35398	523 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	PREP	P48147	710 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	FOXO4	P98177	505 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	MYL7	Q01449	175 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	DEFA6	Q01524	100 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	CSTF1	Q05048	431 aa	Known RBP	6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	FGL1	Q08830	312 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	NFX1	Q12986	1120 aa	Known RBP	6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	BMPR2	Q13873	1038 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	KCNAB1	Q14722	419 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	C2CD6	Q53TS8	623 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	CDKL4	Q5MAI5	379 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	CATSPERG	Q6ZRH7	1159 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	BNIPL	Q7Z465	357 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	ASPG	Q86U10	573 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	CCDC190	Q86UF4	302 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	LDHD	Q86WU2	507 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	TRIM48	Q8IWZ4	208 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	LNX2	Q8N448	690 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	CAMKK1	Q8N5S9	505 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	METTL6	Q8TCB7	284 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	HEXDC	Q8WVB3	486 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	ASB15	Q8WXK1	588 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	NSMAF	Q92636	917 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	UPF1	Q92900	1129 aa	Known RBP eCLIP	6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	ZBTB18	Q99592	522 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	TCEAL7	Q9BRU2	100 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	WDR83	Q9BRX9	315 aa	Known RBP	6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	FGFBP2	Q9BYJ0	223 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	BTBD1	Q9H0C5	482 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	MMP28	Q9H239	520 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	ZNF385D	Q9H6B1	395 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	DYRK4	Q9NR20	520 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	SMYD2	Q9NRG4	433 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	SDHAF2	Q9NX18	166 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	EPHA6	Q9UF33	1036 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	SEPT9	Q9UHD8	586 aa	Predicted RBP	6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	GGA1	Q9UJY5	639 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	OGDHL	Q9ULD0	1010 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	TPRKB	Q9Y3C4	175 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	PCDHB5	Q9Y5E4	795 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	PIAS3	Q9Y6X2	628 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	ADAMTSL3	P82987	1691 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977	RIC1	Q4ADV7	1423 aa		6.23	□□□□□ -1.41
FGD4-208	ENST00000494977		A0A1W2PPL8	197 aa		6.22	□□□□□ -1.41
FGD4-208	ENST00000494977	TCRBV5S4A2T	A0A5A2	114 aa		6.22	□□□□□ -1.41
FGD4-208	ENST00000494977	SLC22A23	A1A5C7	686 aa		6.22	□□□□□ -1.41
FGD4-208	ENST00000494977	EFCAB7	A8K855	629 aa		6.22	□□□□□ -1.41
FGD4-208	ENST00000494977	NEMP1	O14524	444 aa		6.22	□□□□□ -1.41
FGD4-208	ENST00000494977	AIRE	O43918	545 aa		6.22	□□□□□ -1.41
FGD4-208	ENST00000494977	CST8	O60676	142 aa		6.22	□□□□□ -1.41
FGD4-208	ENST00000494977	PROSC	O94903	275 aa		6.22	□□□□□ -1.41
FGD4-208	ENST00000494977	ATG7	O95352	703 aa		6.22	□□□□□ -1.41
FGD4-208	ENST00000494977	GSR	P00390	522 aa		6.22	□□□□□ -1.41
FGD4-208	ENST00000494977	HPR	P00739	348 aa		6.22	□□□□□ -1.41
FGD4-208	ENST00000494977	IGHV2-70	P01814	119 aa		6.22	□□□□□ -1.41
FGD4-208	ENST00000494977	TNNC2	P02585	160 aa		6.22	□□□□□ -1.41
FGD4-208	ENST00000494977	ALPL	P05186	524 aa		6.22	□□□□□ -1.41
FGD4-208	ENST00000494977	FBP1	P09467	338 aa		6.22	□□□□□ -1.41
FGD4-208	ENST00000494977	UMPS	P11172	480 aa		6.22	□□□□□ -1.41
FGD4-208	ENST00000494977	HOXB8	P17481	243 aa	Predicted RBP	6.22	□□□□□ -1.41
FGD4-208	ENST00000494977	PRKCH	P24723	683 aa		6.22	□□□□□ -1.41
FGD4-208	ENST00000494977	CD68	P34810	354 aa	Predicted RBP	6.22	□□□□□ -1.41
FGD4-208	ENST00000494977	VEGFC	P49767	419 aa		6.22	□□□□□ -1.41
FGD4-208	ENST00000494977	CLCNKA	P51800	687 aa		6.22	□□□□□ -1.41
FGD4-208	ENST00000494977	LIMK1	P53667	647 aa		6.22	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms