RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 OR6C1Q96RD1 312 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 COPS8Q99627 209 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 MAP3K3Q99759 626 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 B3GNT4Q9C0J1 378 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 EPB41L1Q9H4G0 881 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 FBXO8Q9NRD0 319 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 ZDHHC3Q9NYG2 299 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 IL17BQ9UHF5 180 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 PILRAQ9UKJ1 303 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 ZNF148Q9UQR1 794 aa10.37□□□□□ -0.75
NELFE-213ENST00000494956 MRPS18BQ9Y676 258 aaKnown RBP10.37□□□□□ -0.75
NELFE-213ENST00000494956 CCDC162PA2VCL2 907 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 OR6C74A6NCV1 312 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 MROH6A6NGR9 719 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 TK2O00142 265 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 POLR1CO15160 346 aaPredicted RBP10.36□□□□□ -0.75
NELFE-213ENST00000494956 KCNJ13O60928 360 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 ANKRD34CP0C6C1 535 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 FOLR1P15328 257 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 FOXN2P32314 431 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 RPL22P35268 128 aaKnown RBP10.36□□□□□ -0.75
NELFE-213ENST00000494956 ATP1A2P50993 1020 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 RAB15P59190 212 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 PDE1BQ01064 536 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 C19orf57Q0VDD7 668 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 ZNF658BQ4V348 819 aaPredicted RBP10.36□□□□□ -0.75
NELFE-213ENST00000494956 CEACAM20Q6UY09 585 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 PPP1R21Q6ZMI0 780 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 PRSS42Q7Z5A4 293 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 DNAAF3Q8N9W5 541 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 OR13J1Q8NGT2 312 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 STYXQ8WUJ0 223 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 ULK4Q96C45 1275 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 ZNF514Q96K75 400 aaPredicted RBP10.36□□□□□ -0.75
NELFE-213ENST00000494956 PPP1R2P1Q96PQ5 205 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 SLC12A9Q9BXP2 914 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 TLR10Q9BXR5 811 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 ASPSCR1Q9BZE9 553 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 ZNF768Q9H5H4 540 aaKnown RBP10.36□□□□□ -0.75
NELFE-213ENST00000494956 COG4Q9H9E3 785 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 RAB6BQ9NRW1 208 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 SLC24A2Q9UI40 661 aa10.36□□□□□ -0.75
NELFE-213ENST00000494956 IGLV3-16A0A075B6K0 115 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 E7EVH7 732 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 H7C0S8 307 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 NKX2-8O15522 239 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 PSMD3O43242 534 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 OR1I1O60431 355 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 KIAA0754O94854 1291 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 ZIC2O95409 532 aaPredicted RBP10.35□□□□□ -0.75
NELFE-213ENST00000494956 DLGAP3O95886 979 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 CCDC175P0C221 793 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 SLC35G4P0C7Q5 338 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 FAM87AP0C7U9 286 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 EBLN1P0CF75 366 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 PRKAR1AP10644 381 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 RALBP11234 206 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 SPTBP11277 2137 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 ITGB6P18564 788 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 POLR2CP19387 275 aaPredicted RBP10.35□□□□□ -0.75
NELFE-213ENST00000494956 F8A1P23610 371 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 MSNP26038 577 aaKnown RBP10.35□□□□□ -0.75
NELFE-213ENST00000494956 STIP1P31948 543 aaKnown RBP10.35□□□□□ -0.75
NELFE-213ENST00000494956 FDFT1P37268 417 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 LMAN1P49257 510 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 KPNA2P52292 529 aaKnown RBP10.35□□□□□ -0.75
NELFE-213ENST00000494956 CRADDP78560 199 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 NFKB2Q00653 900 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 CACNG1Q06432 222 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 CDH17Q12864 832 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 SEMA3AQ14563 771 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 TBR1Q16650 682 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 ATP1A1-AS1Q5TC04 95 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 PRAMEF17Q5VTA0 474 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 CAPRIN2Q6IMN6 1127 aaKnown RBP10.35□□□□□ -0.75
NELFE-213ENST00000494956 LDB1Q86U70 411 aaPredicted RBP10.35□□□□□ -0.75
NELFE-213ENST00000494956 RBM12BQ8IXT5 1001 aaKnown RBP10.35□□□□□ -0.75
NELFE-213ENST00000494956 NLGN4XQ8N0W4 816 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 GALNT6Q8NCL4 622 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 NLGN4YQ8NFZ3 816 aaPredicted RBP10.35□□□□□ -0.75
NELFE-213ENST00000494956 OR4E2Q8NGC2 313 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 HM13Q8TCT9 377 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 KLHL6Q8WZ60 621 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 HDAC10Q969S8 669 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 LINC00615Q96LM1 132 aaPredicted RBP10.35□□□□□ -0.75
NELFE-213ENST00000494956 TEFMQ96QE5 360 aaKnown RBP10.35□□□□□ -0.75
NELFE-213ENST00000494956 FERD3LQ96RJ6 166 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 CCM2Q9BSQ5 444 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 ULBP3Q9BZM4 244 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 OR52A5Q9H2C5 316 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 XKR8Q9H6D3 395 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 AKIRIN1Q9H9L7 192 aaPredicted RBP10.35□□□□□ -0.75
NELFE-213ENST00000494956 HRASLS2Q9NWW9 162 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 SMARCAL1Q9NZC9 954 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 EPHA6Q9UF33 1036 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 FEZ2Q9UHY8 353 aaPredicted RBP10.35□□□□□ -0.75
NELFE-213ENST00000494956 PPP2R2CQ9Y2T4 447 aa10.35□□□□□ -0.75
NELFE-213ENST00000494956 TMEM184BQ9Y519 407 aaPredicted RBP10.35□□□□□ -0.75
NELFE-213ENST00000494956 BAHCC1Q9P281 2608 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 OR5K3A6NET4 321 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms