RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 CAPN5O15484 640 aaPredicted RBP17.25■□□□□ 0.35
HDAC4-211ENST00000494800 SGTAO43765 313 aa17.25■□□□□ 0.35
HDAC4-211ENST00000494800 RASSF9O75901 435 aa17.25■□□□□ 0.35
HDAC4-211ENST00000494800 GOT2P00505 430 aaKnown RBP17.25■□□□□ 0.35
HDAC4-211ENST00000494800 KRT14P02533 472 aa17.25■□□□□ 0.35
HDAC4-211ENST00000494800 ANKRD34CP0C6C1 535 aa17.25■□□□□ 0.35
HDAC4-211ENST00000494800 OR56A5P0C7T3 313 aa17.25■□□□□ 0.35
HDAC4-211ENST00000494800 PRSS56P0CW18 603 aa17.25■□□□□ 0.35
HDAC4-211ENST00000494800 FGF3P11487 239 aaPredicted RBP17.25■□□□□ 0.35
HDAC4-211ENST00000494800 FOXN2P32314 431 aa17.25■□□□□ 0.35
HDAC4-211ENST00000494800 CXADRP78310 365 aa17.25■□□□□ 0.35
HDAC4-211ENST00000494800 ACVR1Q04771 509 aa17.25■□□□□ 0.35
HDAC4-211ENST00000494800 GPS1Q13098 491 aa17.25■□□□□ 0.35
HDAC4-211ENST00000494800 RPA4Q13156 261 aa17.25■□□□□ 0.35
HDAC4-211ENST00000494800 TRIP13Q15645 432 aaPredicted RBP17.25■□□□□ 0.35
HDAC4-211ENST00000494800 LRRC8BQ6P9F7 803 aa17.25■□□□□ 0.35
HDAC4-211ENST00000494800 CCDC137Q6PK04 289 aaKnown RBP17.25■□□□□ 0.35
HDAC4-211ENST00000494800 CLDN19Q8N6F1 224 aa17.25■□□□□ 0.35
HDAC4-211ENST00000494800 NAT14Q8WUY8 206 aa17.25■□□□□ 0.35
HDAC4-211ENST00000494800 ART4Q93070 314 aa17.25■□□□□ 0.35
HDAC4-211ENST00000494800 SGSM3Q96HU1 749 aa17.25■□□□□ 0.35
HDAC4-211ENST00000494800 PDLIM2Q96JY6 352 aa17.25■□□□□ 0.35
HDAC4-211ENST00000494800 C9orf72Q96LT7 481 aa17.25■□□□□ 0.35
HDAC4-211ENST00000494800 INSM2Q96T92 566 aaPredicted RBP17.25■□□□□ 0.35
HDAC4-211ENST00000494800 COG4Q9H9E3 785 aa17.25■□□□□ 0.35
HDAC4-211ENST00000494800 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.24■□□□□ 0.35
HDAC4-211ENST00000494800 C9orf172C9J069 976 aa17.24■□□□□ 0.35
HDAC4-211ENST00000494800 STMND1H3BQB6 276 aa17.24■□□□□ 0.35
HDAC4-211ENST00000494800 C9P02748 559 aa17.24■□□□□ 0.35
HDAC4-211ENST00000494800 TCP1P17987 556 aaKnown RBP17.24■□□□□ 0.35
HDAC4-211ENST00000494800 COILP38432 576 aaPredicted RBP17.24■□□□□ 0.35
HDAC4-211ENST00000494800 VPS41P49754 854 aa17.24■□□□□ 0.35
HDAC4-211ENST00000494800 CLN3Q13286 438 aa17.24■□□□□ 0.35
HDAC4-211ENST00000494800 CYP1B1Q16678 543 aa17.24■□□□□ 0.35
HDAC4-211ENST00000494800 ARMC3Q5W041 872 aa17.24■□□□□ 0.35
HDAC4-211ENST00000494800 ARMC6Q6NXE6 501 aa17.24■□□□□ 0.35
HDAC4-211ENST00000494800 IRGCQ6NXR0 463 aa17.24■□□□□ 0.35
HDAC4-211ENST00000494800 CYB5D1Q6P9G0 228 aa17.24■□□□□ 0.35
HDAC4-211ENST00000494800 GPR155Q7Z3F1 870 aa17.24■□□□□ 0.35
HDAC4-211ENST00000494800 GPR150Q8NGU9 434 aa17.24■□□□□ 0.35
HDAC4-211ENST00000494800 ZPBPQ9BS86 351 aa17.24■□□□□ 0.35
HDAC4-211ENST00000494800 RAB33BQ9H082 229 aa17.24■□□□□ 0.35
HDAC4-211ENST00000494800 CHRAC1Q9NRG0 131 aa17.24■□□□□ 0.35
HDAC4-211ENST00000494800 CATSPERZQ9NTU4 200 aa17.24■□□□□ 0.35
HDAC4-211ENST00000494800 OCIAD1Q9NX40 245 aa17.24■□□□□ 0.35
HDAC4-211ENST00000494800 OGFRQ9NZT2 677 aa17.24■□□□□ 0.35
HDAC4-211ENST00000494800 EPHA6Q9UF33 1036 aa17.24■□□□□ 0.35
HDAC4-211ENST00000494800 SLC2A6Q9UGQ3 507 aa17.24■□□□□ 0.35
HDAC4-211ENST00000494800 CFAP20Q9Y6A4 193 aaKnown RBP17.24■□□□□ 0.35
HDAC4-211ENST00000494800 DSPP15924 2871 aaKnown RBP17.23■□□□□ 0.35
HDAC4-211ENST00000494800 ZFHX4Q86UP3 3567 aa17.23■□□□□ 0.35
HDAC4-211ENST00000494800 CELSR3Q9NYQ7 3312 aa17.23■□□□□ 0.35
HDAC4-211ENST00000494800 LIN7AO14910 233 aaPredicted RBP17.23■□□□□ 0.35
HDAC4-211ENST00000494800 PHF2O75151 1096 aa17.23■□□□□ 0.35
HDAC4-211ENST00000494800 CD151P48509 253 aa17.23■□□□□ 0.35
HDAC4-211ENST00000494800 FNTAP49354 379 aa17.23■□□□□ 0.35
HDAC4-211ENST00000494800 TTPAP49638 278 aa17.23■□□□□ 0.35
HDAC4-211ENST00000494800 GFERP55789 205 aa17.23■□□□□ 0.35
HDAC4-211ENST00000494800 PLOD1Q02809 727 aaPredicted RBP17.23■□□□□ 0.35
HDAC4-211ENST00000494800 SYTL3Q4VX76 610 aa17.23■□□□□ 0.35
HDAC4-211ENST00000494800 CAPRIN2Q6IMN6 1127 aaKnown RBP17.23■□□□□ 0.35
HDAC4-211ENST00000494800 TTC27Q6P3X3 843 aa17.23■□□□□ 0.35
HDAC4-211ENST00000494800 CEACAM20Q6UY09 585 aa17.23■□□□□ 0.35
HDAC4-211ENST00000494800 CCDC81Q6ZN84 652 aa17.23■□□□□ 0.35
HDAC4-211ENST00000494800 OOSP2Q86WS3 158 aa17.23■□□□□ 0.35
HDAC4-211ENST00000494800 SPDYE1Q8NFV5 336 aaPredicted RBP17.23■□□□□ 0.35
HDAC4-211ENST00000494800 COG1Q8WTW3 980 aa17.23■□□□□ 0.35
HDAC4-211ENST00000494800 ELMO1Q92556 727 aa17.23■□□□□ 0.35
HDAC4-211ENST00000494800 RSC1A1Q92681 617 aa17.23■□□□□ 0.35
HDAC4-211ENST00000494800 CCNL2Q96S94 520 aaPredicted RBP17.23■□□□□ 0.35
HDAC4-211ENST00000494800 PRORYQ9H606 182 aa17.23■□□□□ 0.35
HDAC4-211ENST00000494800 KIR3DX1Q9H7L2 352 aa17.23■□□□□ 0.35
HDAC4-211ENST00000494800 FBXO8Q9NRD0 319 aa17.23■□□□□ 0.35
HDAC4-211ENST00000494800 FOXJ2Q9P0K8 574 aa17.23■□□□□ 0.35
HDAC4-211ENST00000494800 LAMA5O15230 3695 aa17.23■□□□□ 0.35
HDAC4-211ENST00000494800 ADAMTS20P59510 1910 aa17.23■□□□□ 0.35
HDAC4-211ENST00000494800 POLR1CO15160 346 aaPredicted RBP17.22■□□□□ 0.35
HDAC4-211ENST00000494800 PFDN6O15212 129 aa17.22■□□□□ 0.35
HDAC4-211ENST00000494800 ATP1A2P50993 1020 aa17.22■□□□□ 0.35
HDAC4-211ENST00000494800 TERF1P54274 439 aa17.22■□□□□ 0.35
HDAC4-211ENST00000494800 MC2RQ01718 297 aa17.22■□□□□ 0.35
HDAC4-211ENST00000494800 PRKAA1Q13131 559 aa17.22■□□□□ 0.35
HDAC4-211ENST00000494800 CACHD1Q5VU97 1274 aa17.22■□□□□ 0.35
HDAC4-211ENST00000494800 PRSS42Q7Z5A4 293 aa17.22■□□□□ 0.35
HDAC4-211ENST00000494800 OTUD6BQ8N6M0 293 aa17.22■□□□□ 0.35
HDAC4-211ENST00000494800 ACVR1CQ8NER5 493 aa17.22■□□□□ 0.35
HDAC4-211ENST00000494800 CRELD1Q96HD1 420 aa17.22■□□□□ 0.35
HDAC4-211ENST00000494800 RMDN2Q96LZ7 410 aa17.22■□□□□ 0.35
HDAC4-211ENST00000494800 ZNF778Q96MU6 729 aa17.22■□□□□ 0.35
HDAC4-211ENST00000494800 FERD3LQ96RJ6 166 aa17.22■□□□□ 0.35
HDAC4-211ENST00000494800 CD180Q99467 661 aa17.22■□□□□ 0.35
HDAC4-211ENST00000494800 ZNF768Q9H5H4 540 aaKnown RBP17.22■□□□□ 0.35
HDAC4-211ENST00000494800 MRM3Q9HC36 420 aaKnown RBP17.22■□□□□ 0.35
HDAC4-211ENST00000494800 SAMD15Q9P1V8 674 aa17.22■□□□□ 0.35
HDAC4-211ENST00000494800 SLC24A2Q9UI40 661 aa17.22■□□□□ 0.35
HDAC4-211ENST00000494800 CFAP47Q6ZTR5 3102 aa17.21■□□□□ 0.35
HDAC4-211ENST00000494800 TEX51A0A1B0GUA7 166 aa17.21■□□□□ 0.35
HDAC4-211ENST00000494800 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.21■□□□□ 0.35
HDAC4-211ENST00000494800 CD3EAPO15446 510 aaKnown RBP17.21■□□□□ 0.35
HDAC4-211ENST00000494800 PAMP19021 973 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms