RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 ZNF542PQ5EBM4 170 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 SFMBT2Q5VUG0 894 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 METRNLQ641Q3 311 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 ISM2Q6H9L7 571 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 NAPEPLDQ6IQ20 393 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 RRAGAQ7L523 313 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 ERICH1Q86X53 443 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 PALM2Q8IXS6 379 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 SCML4Q8N228 414 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 LSM14AQ8ND56 463 aaKnown RBP5.25□□□□□ -1.57
PTCD3-219ENST00000494323 TMIEQ8NEW7 156 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 IRGQQ8WZA9 623 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 FAM149B1Q96BN6 582 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 SNX22Q96L94 193 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 KLHL32Q96NJ5 620 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 LGMNQ99538 433 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 VKORC1Q9BQB6 163 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 TINAGL1Q9GZM7 467 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-219ENST00000494323 ABCG4Q9H172 646 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 GOLPH3LQ9H4A5 285 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 ERVMER34-1Q9H9K5 563 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 COX16Q9P0S2 106 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 CYTH4Q9UIA0 394 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 COQ4Q9Y3A0 265 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 SPTA1P02549 2419 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 COL5A1P20908 1838 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-219ENST00000494323 MAST4O15021 2626 aa5.25□□□□□ -1.57
PTCD3-219ENST00000494323 ATMQ13315 3056 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 HECTD1Q9ULT8 2610 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 TRIM49BA6NDI0 452 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 MBD3L4A6NDZ8 208 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-219ENST00000494323 MBD3L3A6NE82 208 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-219ENST00000494323 KCNU1A8MYU2 1149 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 PRAMEF26H0Y7S4 382 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 J3QKU1 62 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 RNF103O00237 685 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 MCF2LO15068 1137 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 YKT6O15498 198 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 KLK10O43240 276 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 PLRG1O43660 514 aaKnown RBP5.24□□□□□ -1.57
PTCD3-219ENST00000494323 GRAP2O75791 330 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 NEBLO76041 1014 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 PRSS23O95084 383 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 TRUB2O95900 331 aaKnown RBP5.24□□□□□ -1.57
PTCD3-219ENST00000494323 APOEP02649 317 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 PAEPP09466 180 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 THEGLP0DJG4 465 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 PRLRP16471 622 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 TBXAS1P24557 533 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-219ENST00000494323 GPD2P43304 727 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 FMO5P49326 533 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 ZNF135P52742 658 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-219ENST00000494323 PTTG1IPP53801 180 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 CLDN2P57739 230 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 TAS2R38P59533 333 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 RNASE9P60153 205 aaKnown RBP5.24□□□□□ -1.57
PTCD3-219ENST00000494323 FKBP3Q00688 224 aaKnown RBP5.24□□□□□ -1.57
PTCD3-219ENST00000494323 PIGFQ07326 219 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 ILKQ13418 452 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 ELAVL3Q14576 367 aaKnown RBP5.24□□□□□ -1.57
PTCD3-219ENST00000494323 ARL13BQ3SXY8 428 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 RABL3Q5HYI8 236 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 FBXL22Q6P050 247 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 DENND1BQ6P3S1 775 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 GDF7Q7Z4P5 450 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 PPP1R32Q7Z5V6 425 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 TAC4Q86UU9 113 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 CHSY1Q86X52 802 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 CCAR2Q8N163 923 aaKnown RBP5.24□□□□□ -1.57
PTCD3-219ENST00000494323 ZNF557Q8N988 423 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-219ENST00000494323 KDM1BQ8NB78 822 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 ZNF248Q8NDW4 579 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 OR56A1Q8NGH5 318 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 OR52K2Q8NGK3 314 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 LMO3Q8TAP4 145 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 RFFLQ8WZ73 363 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 OR8D1Q8WZ84 308 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 SNX21Q969T3 373 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 SLC35C1Q96A29 364 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 IQCDQ96DY2 449 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 HSFY1Q96LI6 401 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 APOLD1Q96LR9 279 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 SERPINB11Q96P15 392 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 SPAG5Q96R06 1193 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 MED15Q96RN5 788 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 NEU1Q99519 415 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 FEM1AQ9BSK4 669 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.24□□□□□ -1.57
PTCD3-219ENST00000494323 SEMA4CQ9C0C4 833 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 FZD3Q9NPG1 666 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 ACP6Q9NPH0 428 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 SERHLQ9NQF3 203 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 MRPS18AQ9NVS2 196 aaKnown RBP5.24□□□□□ -1.57
PTCD3-219ENST00000494323 ARMCX3Q9UH62 379 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-219ENST00000494323 CHST2Q9Y4C5 530 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 PLEKHM1Q9Y4G2 1056 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 DGKBQ9Y6T7 804 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 UNC13CQ8NB66 2214 aa5.24□□□□□ -1.57
PTCD3-219ENST00000494323 ITIH6Q6UXX5 1313 aa5.23□□□□□ -1.57
PTCD3-219ENST00000494323 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms