RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 KCNJ13O60928 360 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 TIAF1O95411 115 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 CRTAMO95727 393 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 DLGAP3O95886 979 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 PRKAR1AP10644 381 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 MTHFD1P11586 935 aaKnown RBP8.34□□□□□ -1.07
LRCH3-219ENST00000494069 ETS1P14921 441 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 FOLR1P15328 257 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 F8A1P23610 371 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 MC4RP32245 332 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 GRIA1P42261 906 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 CAPZBP47756 277 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 ARCN1P48444 511 aaKnown RBP8.34□□□□□ -1.07
LRCH3-219ENST00000494069 SEPT6Q14141 434 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 BCL7AQ4VC05 210 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 CCDC38Q502W7 563 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 ZRANB3Q5FWF4 1079 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 ATP1A1-AS1Q5TC04 95 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 CEACAM20Q6UY09 585 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 SNX20Q7Z614 316 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 ZNF605Q86T29 641 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 SERPINA9Q86WD7 417 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 PIANPQ8IYJ0 282 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 CFAP206Q8IYR0 622 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 NLGN4XQ8N0W4 816 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 NXPE1Q8N323 547 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 CLDN19Q8N6F1 224 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 GLIS1Q8NBF1 620 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 NLGN4YQ8NFZ3 816 aaPredicted RBP8.34□□□□□ -1.07
LRCH3-219ENST00000494069 OR52K1Q8NGK4 314 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 OR2L2Q8NH16 312 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 C1orf54Q8WWF1 131 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 KLHL6Q8WZ60 621 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 DCUN1D1Q96GG9 259 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 LINC00615Q96LM1 132 aaPredicted RBP8.34□□□□□ -1.07
LRCH3-219ENST00000494069 TEFMQ96QE5 360 aaKnown RBP8.34□□□□□ -1.07
LRCH3-219ENST00000494069 COPS8Q99627 209 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 MAP3K3Q99759 626 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 GUCA1BQ9UMX6 200 aa8.34□□□□□ -1.07
LRCH3-219ENST00000494069 TMEM184BQ9Y519 407 aaPredicted RBP8.34□□□□□ -1.07
LRCH3-219ENST00000494069 MRPS18BQ9Y676 258 aaKnown RBP8.34□□□□□ -1.07
LRCH3-219ENST00000494069 OR6C74A6NCV1 312 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 B8ZZF3 427 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 LIASO43766 372 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 AP2A1O95782 977 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 ITGB2P05107 769 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 ZSCAN5DPP0CG00 497 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 ATP1B2P14415 290 aaPredicted RBP8.33□□□□□ -1.08
LRCH3-219ENST00000494069 ITGB6P18564 788 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 ITGALP20701 1170 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 MAP4P27816 1152 aaKnown RBP8.33□□□□□ -1.08
LRCH3-219ENST00000494069 PDHA2P29803 388 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 NFATC3Q12968 1075 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 SNX1Q13596 522 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 PLCL1Q15111 1095 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 OASLQ15646 514 aaKnown RBP8.33□□□□□ -1.08
LRCH3-219ENST00000494069 DBN1Q16643 649 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 ZNF658BQ4V348 819 aaPredicted RBP8.33□□□□□ -1.08
LRCH3-219ENST00000494069 CAPRIN2Q6IMN6 1127 aaKnown RBP8.33□□□□□ -1.08
LRCH3-219ENST00000494069 NAPRTQ6XQN6 538 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 TAS2R42Q7RTR8 314 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 PRSS42Q7Z5A4 293 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 SLC13A5Q86YT5 568 aaPredicted RBP8.33□□□□□ -1.08
LRCH3-219ENST00000494069 RBM12BQ8IXT5 1001 aaKnown RBP8.33□□□□□ -1.08
LRCH3-219ENST00000494069 RNF10Q8N5U6 811 aaKnown RBP8.33□□□□□ -1.08
LRCH3-219ENST00000494069 ZSCAN1Q8NBB4 408 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 GALNT6Q8NCL4 622 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 PHC3Q8NDX5 983 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 ZDHHC12Q96GR4 267 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 CDKN2AIPNLQ96HQ2 116 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 ZNF514Q96K75 400 aaPredicted RBP8.33□□□□□ -1.08
LRCH3-219ENST00000494069 ARHGAP9Q9BRR9 750 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 ULBP3Q9BZM4 244 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 RAB33BQ9H082 229 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 ZNF106Q9H2Y7 1883 aaKnown RBP8.33□□□□□ -1.08
LRCH3-219ENST00000494069 LRRC40Q9H9A6 602 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 AKIRIN1Q9H9L7 192 aaPredicted RBP8.33□□□□□ -1.08
LRCH3-219ENST00000494069 GPN2Q9H9Y4 310 aaPredicted RBP8.33□□□□□ -1.08
LRCH3-219ENST00000494069 ETNK1Q9HBU6 452 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 NLE1Q9NVX2 485 aaPredicted RBP8.33□□□□□ -1.08
LRCH3-219ENST00000494069 ZDHHC3Q9NYG2 299 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 SEMA5BQ9P283 1151 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 EPHA6Q9UF33 1036 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 SLC2A6Q9UGQ3 507 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 FEZ2Q9UHY8 353 aaPredicted RBP8.33□□□□□ -1.08
LRCH3-219ENST00000494069 SLC24A2Q9UI40 661 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 PRSS21Q9Y6M0 314 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 COL6A6A6NMZ7 2263 aa8.33□□□□□ -1.08
LRCH3-219ENST00000494069 HELZ2Q9BYK8 2649 aaKnown RBP8.33□□□□□ -1.08
LRCH3-219ENST00000494069 IGLV3-16A0A075B6K0 115 aa8.32□□□□□ -1.08
LRCH3-219ENST00000494069 TRBV5-4A0A0C4DH59 114 aa8.32□□□□□ -1.08
LRCH3-219ENST00000494069 CCDC162PA2VCL2 907 aa8.32□□□□□ -1.08
LRCH3-219ENST00000494069 OR5K3A6NET4 321 aa8.32□□□□□ -1.08
LRCH3-219ENST00000494069 MROH6A6NGR9 719 aa8.32□□□□□ -1.08
LRCH3-219ENST00000494069 H7C0S8 307 aa8.32□□□□□ -1.08
LRCH3-219ENST00000494069 TOX3O15405 576 aaPredicted RBP8.32□□□□□ -1.08
LRCH3-219ENST00000494069 SPAG6O75602 509 aa8.32□□□□□ -1.08
LRCH3-219ENST00000494069 KIAA0754O94854 1291 aa8.32□□□□□ -1.08
LRCH3-219ENST00000494069 IFNB1P01574 187 aa8.32□□□□□ -1.08
LRCH3-219ENST00000494069 SLC35G4P0C7Q5 338 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms