RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-222	ENST00000493792	LDB1	Q86U70	411 aa	Predicted RBP	10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	CAND1	Q86VP6	1230 aa	Known RBP	10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	JAML	Q86YT9	394 aa		10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	CFAP206	Q8IYR0	622 aa		10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	LSMEM2	Q8N112	164 aa		10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	OR2L2	Q8NH16	312 aa		10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	HM13	Q8TCT9	377 aa		10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	NCSTN	Q92542	709 aa		10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	PEX13	Q92968	403 aa		10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	ZNF669	Q96BR6	464 aa	Predicted RBP	10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	GRAMD1A	Q96CP6	724 aa		10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	MFSD3	Q96ES6	412 aa		10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	C12orf66	Q96MD2	445 aa		10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	KRT12	Q99456	494 aa		10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	NUDT22	Q9BRQ3	303 aa		10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	CCM2	Q9BSQ5	444 aa		10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	TBC1D10A	Q9BXI6	508 aa		10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	PIEZO2	Q9H5I5	2752 aa		10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	SARS2	Q9NP81	518 aa	Known RBP	10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	ASCL3	Q9NQ33	180 aa		10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	POT1	Q9NUX5	634 aa		10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	WDR70	Q9NW82	654 aa		10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	IL17B	Q9UHF5	180 aa		10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	PCYOX1	Q9UHG3	505 aa		10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	SOX13	Q9UN79	622 aa		10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	WDR37	Q9Y2I8	494 aa		10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	NEU2	Q9Y3R4	380 aa		10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	ENTPD2	Q9Y5L3	495 aa		10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	CFAP20	Q9Y6A4	193 aa	Known RBP	10.2	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	PTPN13	Q12923	2485 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	IGLV3-16	A0A075B6K0	115 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	IGHV1OR21-1	A0A087WYE8	117 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	CCDC187	A0A096LP49	1063 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	PRAMEF33	A0A0G2JMD5	474 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	UBA6	A0AVT1	1052 aa	Predicted RBP	10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	KLHL33	A6NCF5	533 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	SDR42E2	A6NKP2	422 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	GOLGA8K	D6RF30	607 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	GOLGA8T	H3BQL2	631 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	TMX2-CTNND1	H3BSU7	103 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	QSOX1	O00391	747 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	DNALI1	O14645	258 aa	Predicted RBP	10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	CD3EAP	O15446	510 aa	Known RBP	10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	TTI1	O43156	1089 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	OR1I1	O60431	355 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	NDUFS3	O75489	264 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	FTH1	P02794	183 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	OR56A5	P0C7T3	313 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	MLN	P12872	115 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	BRAF	P15056	766 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	TYRP1	P17643	537 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	ITGB6	P18564	788 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	XRCC1	P18887	633 aa	Predicted RBP	10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	PSMA3	P25788	255 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	CD1C	P29017	333 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	SLC19A1	P41440	591 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	PTGIR	P43119	386 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	MAGEA6	P43360	314 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	CSE1L	P55060	971 aa	Known RBP	10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	PCBP4	P57723	403 aa	Known RBP	10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	ERVPABLB-1	P60509	514 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	GPLD1	P80108	840 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	MRPS25	P82663	173 aa	Known RBP	10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	ACVR1	Q04771	509 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	C2orf54	Q08AI8	447 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	DMPK	Q09013	629 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	BOP1	Q14137	746 aa	Known RBP	10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	SEMA3A	Q14563	771 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	CLCA4	Q14CN2	919 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	PLCL1	Q15111	1095 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	COLEC12	Q5KU26	742 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	RNASEH2B	Q5TBB1	312 aa	Known RBP	10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	AGAP9	Q5VTM2	703 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	IGF2-AS	Q6U949	168 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	SYDE1	Q6ZW31	735 aa	Predicted RBP	10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	ZNF438	Q7Z4V0	828 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	PCGF5	Q86SE9	256 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	LILRA3	Q8N6C8	439 aa	Predicted RBP	10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	NAT8L	Q8N9F0	302 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	MCU	Q8NE86	351 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	JPH3	Q8WXH2	748 aa	Predicted RBP	10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	ELMO1	Q92556	727 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	SERPINB12	Q96P63	405 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	KIFC1	Q9BW19	673 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	SEMA6C	Q9H3T2	930 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	POLR1B	Q9H9Y6	1135 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	MRM3	Q9HC36	420 aa	Known RBP	10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	AKAP7	Q9P0M2	348 aa	Predicted RBP	10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	MARCH4	Q9P2E8	410 aa	Predicted RBP	10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	ZNF624	Q9P2J8	865 aa	Predicted RBP	10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	KLHL3	Q9UH77	587 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	ACSL5	Q9ULC5	683 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	SATB2	Q9UPW6	733 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	PRSS21	Q9Y6M0	314 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	BSN	Q9UPA5	3926 aa		10.19	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	UNC79	Q9P2D8	2635 aa		10.18	□□□□□ -0.78
TRAPPC12-222	ENST00000493792		A0A1W2PNU3	283 aa	Predicted RBP	10.18	□□□□□ -0.78
TRAPPC12-222	ENST00000493792		A8MU76	341 aa		10.18	□□□□□ -0.78
TRAPPC12-222	ENST00000493792	EFCAB8	A8MWE9	144 aa		10.18	□□□□□ -0.78

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