RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 A8MT66 165 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 PRAMEF26H0Y7S4 382 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 STK25O00506 426 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 FPGTO14772 594 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 LIN7AO14910 233 aaPredicted RBP12.42□□□□□ -0.42
VPS52-220ENST00000493674 SNNO75324 88 aaPredicted RBP12.42□□□□□ -0.42
VPS52-220ENST00000493674 FUCA1P04066 466 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 CEACAM5P06731 702 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 KCNA4P22459 653 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 ATP5F1P24539 256 aaPredicted RBP12.42□□□□□ -0.42
VPS52-220ENST00000493674 AVPR2P30518 371 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 AKT2P31751 481 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 PRKAA2P54646 552 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 DNAJB13P59910 316 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 YPEL5P62699 121 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 DMPKQ09013 629 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 NFATC4Q14934 902 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 TSNQ15631 228 aaKnown RBP12.42□□□□□ -0.42
VPS52-220ENST00000493674 ADAMTSL2Q86TH1 951 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 TRAPPC5Q8IUR0 188 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 VRK3Q8IV63 474 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 TRIM42Q8IWZ5 723 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 SLC22A15Q8IZD6 547 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 CADM4Q8NFZ8 388 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 OR2L2Q8NH16 312 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 STAG3L4Q8TBR4 150 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 HM13Q8TCT9 377 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 LRRC8CQ8TDW0 803 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 ASZ1Q8WWH4 475 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 RLN3Q8WXF3 142 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 ELMO1Q92556 727 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 BIRC7Q96CA5 298 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 EPN3Q9H201 632 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 MANSC1Q9H8J5 431 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 TMCO1Q9UM00 188 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 TMEM98Q9Y2Y6 226 aa12.42□□□□□ -0.42
VPS52-220ENST00000493674 ADAMTS9Q9P2N4 1935 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 A0A1W2PPC4 97 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 WDR91A4D1P6 747 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 MGAT4DA6NG13 374 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 TCP11X1B4DZS4 312 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 GFYI3L273 518 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 CACNB4O00305 520 aaPredicted RBP12.41□□□□□ -0.42
VPS52-220ENST00000493674 BTN3A1O00481 513 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 AXIN1O15169 862 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 TRIM13O60858 407 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 H2AFYO75367 372 aaKnown RBP12.41□□□□□ -0.42
VPS52-220ENST00000493674 MATN4O95460 622 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 SERPINE1P05121 402 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 HK3P52790 923 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 CLDN2P57739 230 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 ARHGAP8P85298 464 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 GABPB1Q06547 395 aaPredicted RBP12.41□□□□□ -0.42
VPS52-220ENST00000493674 BST1Q10588 318 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 SP140Q13342 867 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 BOP1Q14137 746 aaKnown RBP12.41□□□□□ -0.42
VPS52-220ENST00000493674 CHI3L2Q15782 390 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 TPRG1LQ5T0D9 272 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 LIPMQ5VYY2 423 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 NAPRTQ6XQN6 538 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 LRRTM4Q86VH4 590 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 MYO1HQ8N1T3 1032 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 TMEM105Q8N8V8 129 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 CCDC63Q8NA47 563 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 DLG3Q92796 817 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 CCDC126Q96EE4 140 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 L3HYPDHQ96EM0 354 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 CHMP6Q96FZ7 201 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 MYOCQ99972 504 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 TIMM29Q9BSF4 260 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 COG4Q9H9E3 785 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 RDH14Q9HBH5 336 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 FGF22Q9HCT0 170 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 NUDT4Q9NZJ9 180 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 ADAMTS6Q9UKP5 1117 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 CA5BQ9Y2D0 317 aa12.41□□□□□ -0.42
VPS52-220ENST00000493674 GMNCA6NCL1 334 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 NEMP2A6NFY4 417 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 SYCE1LA8MT33 242 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 METTL12A8MUP2 240 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 H0Y8X5 98 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 STX16-NPEPL1H3BU86 382 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 UBXN8O00124 270 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 STX16O14662 325 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 TNFRSF10CO14798 259 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 KMOO15229 486 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 SLC16A5O15375 505 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 GRID2O43424 1007 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 GALR2O43603 387 aaPredicted RBP12.4□□□□□ -0.42
VPS52-220ENST00000493674 RRP9O43818 475 aaKnown RBP12.4□□□□□ -0.42
VPS52-220ENST00000493674 EDF1O60869 148 aaKnown RBP12.4□□□□□ -0.42
VPS52-220ENST00000493674 POP7O75817 140 aaKnown RBP12.4□□□□□ -0.42
VPS52-220ENST00000493674 IPO13O94829 963 aaKnown RBP12.4□□□□□ -0.42
VPS52-220ENST00000493674 FSBPO95073 299 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 C8GP07360 202 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 DRD4P21917 467 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 GRK2P25098 689 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 ARRB2P32121 409 aa12.4□□□□□ -0.42
VPS52-220ENST00000493674 PXNP49023 591 aaPredicted RBP12.4□□□□□ -0.42
VPS52-220ENST00000493674 SEC24CP53992 1094 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms