RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 SRPK1Q96SB4 655 aaKnown RBP13.86□□□□□ -0.19
PRPF40A-211ENST00000493468 WDR77Q9BQA1 342 aaPredicted RBP13.86□□□□□ -0.19
PRPF40A-211ENST00000493468 TLR10Q9BXR5 811 aa13.86□□□□□ -0.19
PRPF40A-211ENST00000493468 ZCCHC2Q9C0B9 1178 aaKnown RBP13.86□□□□□ -0.19
PRPF40A-211ENST00000493468 KIR3DX1Q9H7L2 352 aa13.86□□□□□ -0.19
PRPF40A-211ENST00000493468 C1GALT1Q9NS00 363 aa13.86□□□□□ -0.19
PRPF40A-211ENST00000493468 POMT2Q9UKY4 750 aa13.86□□□□□ -0.19
PRPF40A-211ENST00000493468 SHOC2Q9UQ13 582 aa13.86□□□□□ -0.19
PRPF40A-211ENST00000493468 KLF2Q9Y5W3 355 aaPredicted RBP13.86□□□□□ -0.19
PRPF40A-211ENST00000493468 TMEM150CB9EJG8 249 aa13.85□□□□□ -0.19
PRPF40A-211ENST00000493468 PEX12O00623 359 aa13.85□□□□□ -0.19
PRPF40A-211ENST00000493468 CD63P08962 238 aa13.85□□□□□ -0.19
PRPF40A-211ENST00000493468 MX2P20592 715 aa13.85□□□□□ -0.19
PRPF40A-211ENST00000493468 AGXTP21549 392 aa13.85□□□□□ -0.19
PRPF40A-211ENST00000493468 TSFMP43897 325 aaKnown RBP13.85□□□□□ -0.19
PRPF40A-211ENST00000493468 ART3Q13508 389 aa13.85□□□□□ -0.19
PRPF40A-211ENST00000493468 BECN1Q14457 450 aa13.85□□□□□ -0.19
PRPF40A-211ENST00000493468 PTCHD3Q3KNS1 767 aa13.85□□□□□ -0.19
PRPF40A-211ENST00000493468 ATP13A5Q4VNC0 1218 aa13.85□□□□□ -0.19
PRPF40A-211ENST00000493468 HGSNATQ68CP4 663 aa13.85□□□□□ -0.19
PRPF40A-211ENST00000493468 FAM83HQ6ZRV2 1179 aaPredicted RBP13.85□□□□□ -0.19
PRPF40A-211ENST00000493468 HDAC11Q96DB2 347 aa13.85□□□□□ -0.19
PRPF40A-211ENST00000493468 LURAP1Q96LR2 239 aa13.85□□□□□ -0.19
PRPF40A-211ENST00000493468 TTC25Q96NG3 672 aa13.85□□□□□ -0.19
PRPF40A-211ENST00000493468 GPR63Q9BZJ6 419 aa13.85□□□□□ -0.19
PRPF40A-211ENST00000493468 IMP3Q9NV31 184 aaKnown RBP13.85□□□□□ -0.19
PRPF40A-211ENST00000493468 COPG2Q9UBF2 871 aa13.85□□□□□ -0.19
PRPF40A-211ENST00000493468 LIMA1Q9UHB6 759 aaKnown RBP13.85□□□□□ -0.19
PRPF40A-211ENST00000493468 SLC24A2Q9UI40 661 aa13.85□□□□□ -0.19
PRPF40A-211ENST00000493468 PSMD13Q9UNM6 376 aa13.85□□□□□ -0.19
PRPF40A-211ENST00000493468 NOVA2Q9UNW9 492 aaKnown RBP13.85□□□□□ -0.19
PRPF40A-211ENST00000493468 MYO7BQ6PIF6 2116 aa13.84□□□□□ -0.19
PRPF40A-211ENST00000493468 OR6C74A6NCV1 312 aa13.84□□□□□ -0.19
PRPF40A-211ENST00000493468 LCA5LO95447 670 aa13.84□□□□□ -0.19
PRPF40A-211ENST00000493468 ARSEP51690 589 aa13.84□□□□□ -0.19
PRPF40A-211ENST00000493468 UBXN1Q04323 297 aa13.84□□□□□ -0.19
PRPF40A-211ENST00000493468 MMRN1Q13201 1228 aa13.84□□□□□ -0.19
PRPF40A-211ENST00000493468 XRCC4Q13426 336 aa13.84□□□□□ -0.19
PRPF40A-211ENST00000493468 SLC14A2Q15849 920 aa13.84□□□□□ -0.19
PRPF40A-211ENST00000493468 ANO6Q4KMQ2 910 aa13.84□□□□□ -0.19
PRPF40A-211ENST00000493468 ZFYVE27Q5T4F4 411 aa13.84□□□□□ -0.19
PRPF40A-211ENST00000493468 METRNLQ641Q3 311 aa13.84□□□□□ -0.19
PRPF40A-211ENST00000493468 B3GNTL1Q67FW5 361 aaPredicted RBP13.84□□□□□ -0.19
PRPF40A-211ENST00000493468 IGFL2Q6UWQ7 119 aa13.84□□□□□ -0.19
PRPF40A-211ENST00000493468 BEND7Q8N7W2 519 aaPredicted RBP13.84□□□□□ -0.19
PRPF40A-211ENST00000493468 ANKRD20A12PQ8NF67 263 aa13.84□□□□□ -0.19
PRPF40A-211ENST00000493468 GRHL3Q8TE85 626 aa13.84□□□□□ -0.19
PRPF40A-211ENST00000493468 FAR1Q8WVX9 515 aa13.84□□□□□ -0.19
PRPF40A-211ENST00000493468 PPM1MQ96MI6 270 aa13.84□□□□□ -0.19
PRPF40A-211ENST00000493468 P4HTMQ9NXG6 502 aa13.84□□□□□ -0.19
PRPF40A-211ENST00000493468 SERTAD3Q9UJW9 196 aa13.84□□□□□ -0.19
PRPF40A-211ENST00000493468 A0A1W2PQJ5 194 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 KLHL33A6NCF5 533 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 SLC9B1P1A6NJY1 282 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 E7EQ34 232 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 POP7O75817 140 aaKnown RBP13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 SLC4A1P02730 911 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 CD48P09326 243 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 PIRTP0C851 137 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 HLA-DPA1P20036 260 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 CDH3P22223 829 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 FOLR3P41439 243 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 PREPP48147 710 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 CTSCP53634 463 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 IFI35P80217 286 aaPredicted RBP13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 PRKAA1Q13131 559 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 DPYSL3Q14195 570 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 NFE2L1Q14494 772 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 ZDHHC20Q5W0Z9 365 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 FCRL6Q6DN72 434 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 FBXO38Q6PIJ6 1188 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 TTC30BQ8N4P2 665 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 CNTD1Q8N815 330 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 RASGEF1AQ8N9B8 481 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 DDHD1Q8NEL9 900 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 OR2Y1Q8NGV0 311 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 GDAP1Q8TB36 358 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 RELTQ969Z4 430 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 IMP4Q96G21 291 aaKnown RBP13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 INSM2Q96T92 566 aaPredicted RBP13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 SLX1AQ9BQ83 275 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 ZNF670Q9BS34 389 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 PITPNM3Q9BZ71 974 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 SLC7A5P2Q9GIP4 190 aa13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 ZBTB20Q9HC78 741 aaPredicted RBP13.83□□□□□ -0.2
PRPF40A-211ENST00000493468 LRRC10BA6NIK2 292 aa13.82□□□□□ -0.2
PRPF40A-211ENST00000493468 ZNF749O43361 778 aa13.82□□□□□ -0.2
PRPF40A-211ENST00000493468 LDB2O43679 373 aa13.82□□□□□ -0.2
PRPF40A-211ENST00000493468 NDUFS1P28331 727 aa13.82□□□□□ -0.2
PRPF40A-211ENST00000493468 HMGCLP35914 325 aa13.82□□□□□ -0.2
PRPF40A-211ENST00000493468 PRKCIP41743 596 aa13.82□□□□□ -0.2
PRPF40A-211ENST00000493468 AIMP2Q13155 320 aaKnown RBP13.82□□□□□ -0.2
PRPF40A-211ENST00000493468 LDLRAP1Q5SW96 308 aa13.82□□□□□ -0.2
PRPF40A-211ENST00000493468 ZNF571Q7Z3V5 609 aaPredicted RBP13.82□□□□□ -0.2
PRPF40A-211ENST00000493468 NACC2Q96BF6 587 aa13.82□□□□□ -0.2
PRPF40A-211ENST00000493468 TADA1Q96BN2 335 aa13.82□□□□□ -0.2
PRPF40A-211ENST00000493468 FAF2Q96CS3 445 aa13.82□□□□□ -0.2
PRPF40A-211ENST00000493468 C12orf66Q96MD2 445 aa13.82□□□□□ -0.2
PRPF40A-211ENST00000493468 TRAPPC9Q96Q05 1148 aa13.82□□□□□ -0.2
PRPF40A-211ENST00000493468 ISCUQ9H1K1 167 aa13.82□□□□□ -0.2
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