RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 C19orf12Q9NSK7 152 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 PCMTD2Q9NV79 361 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 MS4A12Q9NXJ0 267 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 MTMR4Q9NYA4 1195 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 GRHL1Q9NZI5 618 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 KLHL8Q9P2G9 620 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-220ENST00000492859 SCML1Q9UN30 329 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 RHBDD3Q9Y3P4 386 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 ERBINQ96RT1 1412 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 A0A096LPE4 126 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 TRAV25A0A0B4J276 109 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 TRBV2A0A0J9YWF9 115 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 A0A1W2PPZ6 126 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 TCRBV21S2A2A0A5A6 115 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 C17orf102A2RUQ5 167 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 ARHGEF35A5YM69 484 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 TCAF2A6NFQ2 919 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 FAM90A20PA6NIJ5 464 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 TCP11X1B4DZS4 312 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 N4BP3O15049 544 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 BUD23O43709 281 aaKnown RBP4.15□□□□□ -1.74
BRCA1-220ENST00000492859 DFNA5O60443 496 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 TULP3O75386 442 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 NDUFS3O75489 264 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 CLEC3AO75596 197 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 PDE9AO76083 593 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 CNTN5O94779 1100 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 PRPF6O94906 941 aaKnown RBP4.15□□□□□ -1.74
BRCA1-220ENST00000492859 LUC7L3O95232 432 aaKnown RBP4.15□□□□□ -1.74
BRCA1-220ENST00000492859 SNAI1O95863 264 aaPredicted RBP4.15□□□□□ -1.74
BRCA1-220ENST00000492859 CHRM2P08172 466 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 CTXN2P0C2S0 81 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 AKR1A1P14550 325 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 TCF4P15884 667 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 GABRB1P18505 474 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 ITGAXP20702 1163 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 SP100P23497 879 aaPredicted RBP4.15□□□□□ -1.74
BRCA1-220ENST00000492859 PIK3R1P27986 724 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 PSMB6P28072 239 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 OXTRP30559 389 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 YWHABP31946 246 aaKnown RBP4.15□□□□□ -1.74
BRCA1-220ENST00000492859 PHKA2P46019 1235 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 CSNK1EP49674 416 aaKnown RBP4.15□□□□□ -1.74
BRCA1-220ENST00000492859 MFAP4P55083 255 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 CDH4P55283 916 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 JAM2P57087 298 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 SIGLEC14Q08ET2 396 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 RCAN2Q14206 197 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 HEPACAMQ14CZ8 416 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 FAM189A2Q15884 450 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 ARSJQ5FYB0 599 aaPredicted RBP4.15□□□□□ -1.74
BRCA1-220ENST00000492859 ZNF667Q5HYK9 610 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 BRMS1LQ5PSV4 323 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 TTC38Q5R3I4 469 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 LCE3BQ5TA77 95 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 IER5Q5VY09 327 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 BSPRYQ5W0U4 402 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 RAP1GAP2Q684P5 730 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 ZNF470Q6ECI4 717 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 KIAA0930Q6ICG6 404 aaPredicted RBP4.15□□□□□ -1.74
BRCA1-220ENST00000492859 SPOPLQ6IQ16 392 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 RGS7BPQ6MZT1 257 aaPredicted RBP4.15□□□□□ -1.74
BRCA1-220ENST00000492859 CDPF1Q6NVV7 123 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 MAMDC4Q6UXC1 1216 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 TMPRSS7Q7RTY8 843 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 CXorf67Q86X51 503 aaPredicted RBP4.15□□□□□ -1.74
BRCA1-220ENST00000492859 PLA2G4DQ86XP0 818 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 NME9Q86XW9 330 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 VRK2Q86Y07 508 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 SLC13A5Q86YT5 568 aaPredicted RBP4.15□□□□□ -1.74
BRCA1-220ENST00000492859 UNC5BQ8IZJ1 945 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 ABRAQ8N0Z2 381 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 FBXL16Q8N461 479 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 ARHGEF39Q8N4T4 335 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 TC2NQ8N9U0 490 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 OR4K14Q8NGD5 310 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 OR52N1Q8NH53 320 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 MAGEC3Q8TD91 643 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 SLC2A14Q8TDB8 520 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 MCOLN3Q8TDD5 553 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 WDR60Q8WVS4 1066 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 LPGAT1Q92604 370 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 GTF3AQ92664 365 aaKnown RBP4.15□□□□□ -1.74
BRCA1-220ENST00000492859 HAS2Q92819 552 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 RFT1Q96AA3 541 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 NTAN1Q96AB6 310 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 ZNF837Q96EG3 531 aaPredicted RBP4.15□□□□□ -1.74
BRCA1-220ENST00000492859 RNFT2Q96EX2 444 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 C16orf58Q96GQ5 468 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 BOD1Q96IK1 185 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 PLEKHA8Q96JA3 519 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 HSH2DQ96JZ2 352 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 PHACTR3Q96KR7 559 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 CCDC140Q96MF4 163 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 FOXN4Q96NZ1 517 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 OLFM3Q96PB7 478 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 PAFAH2Q99487 392 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 CHP1Q99653 195 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 SMOQ99835 787 aa4.15□□□□□ -1.74
BRCA1-220ENST00000492859 PSD2Q9BQI7 771 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms