RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 ALG11Q2TAA5 492 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 KBTBD12Q3ZCT8 623 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 SLC9B1Q4ZJI4 515 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 PPP6R3Q5H9R7 873 aaPredicted RBP3.23□□□□□ -1.89
VPS36-205ENST00000492650 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 HIST2H2BCQ6DN03 193 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 PLEKHA7Q6IQ23 1121 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 IRGCQ6NXR0 463 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 CDC73Q6P1J9 531 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 LINC00696Q6ZRV3 163 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 OTOAQ7RTW8 1153 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 DSG4Q86SJ6 1040 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 TICAM1Q8IUC6 712 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 RNF168Q8IYW5 571 aaPredicted RBP3.23□□□□□ -1.89
VPS36-205ENST00000492650 HDDC3Q8N4P3 179 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 METTL27Q8N6F8 245 aaPredicted RBP3.23□□□□□ -1.89
VPS36-205ENST00000492650 WDSUB1Q8N9V3 476 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 TMEM116Q8NCL8 245 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 SPATA22Q8NHS9 363 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 RND1Q92730 232 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 SYAP1Q96A49 352 aaPredicted RBP3.23□□□□□ -1.89
VPS36-205ENST00000492650 INTS12Q96CB8 462 aaKnown RBP3.23□□□□□ -1.89
VPS36-205ENST00000492650 PGAM5Q96HS1 289 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 VPS39Q96JC1 886 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 ZNF570Q96NI8 536 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 CD180Q99467 661 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 CLSTN3Q9BQT9 956 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 SYT17Q9BSW7 474 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 MRPL1Q9BYD6 325 aaKnown RBP3.23□□□□□ -1.89
VPS36-205ENST00000492650 NUF2Q9BZD4 464 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 EPHX3Q9H6B9 360 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 C17orf75Q9HAS0 396 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 IL1RAPL2Q9NP60 686 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 FANCFQ9NPI8 374 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 MBNL1Q9NR56 388 aaKnown RBP3.23□□□□□ -1.89
VPS36-205ENST00000492650 TAS2R3Q9NYW6 316 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 TAAR2Q9P1P5 351 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 ACTR3BQ9P1U1 418 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 SEC63Q9UGP8 760 aaKnown RBP3.23□□□□□ -1.89
VPS36-205ENST00000492650 ANAPC2Q9UJX6 822 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 NFE2L3Q9Y4A8 694 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 TRIM17Q9Y577 477 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 AP1M2Q9Y6Q5 423 aa3.23□□□□□ -1.89
VPS36-205ENST00000492650 PDS5AQ29RF7 1337 aaKnown RBP3.22□□□□□ -1.89
VPS36-205ENST00000492650 IGSF1Q8N6C5 1336 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 A0A0U1RQF3 1178 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 RNF103-CHMP3A0A140T963 221 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 A0A1W2PS18 150 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 TRBC2A0A5B9 178 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 OR2A25A4D2G3 310 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 ASPDHA6ND91 283 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 CBY3A6NI87 242 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 ERI2A8K979 691 aaKnown RBP3.22□□□□□ -1.89
VPS36-205ENST00000492650 CDRT15L2A8MXV6 281 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 RNF103O00237 685 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 ZBTB43O43298 467 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 NOL3O60936 208 aaKnown RBP3.22□□□□□ -1.89
VPS36-205ENST00000492650 SNX4O95219 450 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 RB1P06400 928 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 TUBBP07437 444 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 CD58P19256 250 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 CHATP28329 748 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 PRPHP41219 470 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 CASP3P42574 277 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 SLC15A1P46059 708 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 NT5C2P49902 561 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 NPY4RP50391 375 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 STAT2P52630 851 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 LINC01547P58512 204 aaPredicted RBP3.22□□□□□ -1.89
VPS36-205ENST00000492650 RELQ04864 619 aaPredicted RBP3.22□□□□□ -1.89
VPS36-205ENST00000492650 MRPL28Q13084 256 aaKnown RBP3.22□□□□□ -1.89
VPS36-205ENST00000492650 ITGA7Q13683 1181 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 ALCAMQ13740 583 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 PTK6Q13882 451 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 TUBB2AQ13885 445 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 CTF1Q16619 201 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 KRT71Q3SY84 523 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 ZRANB3Q5FWF4 1079 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 NHSL2Q5HYW2 709 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 CCBE1Q6UXH8 406 aaPredicted RBP3.22□□□□□ -1.89
VPS36-205ENST00000492650 MSANTD1Q6ZTZ1 278 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 ERN2Q76MJ5 926 aaKnown RBP3.22□□□□□ -1.89
VPS36-205ENST00000492650 RABEPKQ7Z6M1 372 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 TMEM110Q86TL2 294 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 ARHGAP12Q8IWW6 846 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 ODF3L1Q8IXM7 274 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 PEX5LQ8IYB4 626 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 DSELQ8IZU8 1212 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 DENND6BQ8NEG7 585 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 GRAPLQ8TC17 118 aaPredicted RBP3.22□□□□□ -1.89
VPS36-205ENST00000492650 NOC3LQ8WTT2 800 aaKnown RBP3.22□□□□□ -1.89
VPS36-205ENST00000492650 KCNE4Q8WWG9 221 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 MRPS27Q92552 414 aaKnown RBP3.22□□□□□ -1.89
VPS36-205ENST00000492650 SNAPC3Q92966 411 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 SMARCE1Q969G3 411 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 FAM149B1Q96BN6 582 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 KLHL29Q96CT2 875 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 SAT2Q96F10 170 aaPredicted RBP3.22□□□□□ -1.89
VPS36-205ENST00000492650 CFAP57Q96MR6 1250 aa3.22□□□□□ -1.89
VPS36-205ENST00000492650 WDFY2Q96P53 400 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms