RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 MTHFD1P11586 935 aaKnown RBP8.92□□□□□ -0.98
HDAC3-212ENST00000492407 FOLR1P15328 257 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 MSH3P20585 1137 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 COMTP21964 271 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 LPOP22079 712 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-212ENST00000492407 VARSP26640 1264 aaKnown RBP8.92□□□□□ -0.98
HDAC3-212ENST00000492407 ARL4DP49703 201 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 GSDMDP57764 484 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 CHRNA6Q15825 494 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 IGFBP7Q16270 282 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 PPP2R5EQ16537 467 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 ZSCAN26Q16670 478 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 TSNAXIP1Q2TAA8 658 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 BCL7AQ4VC05 210 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 SIRPB2Q5JXA9 342 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 ATP1A1-AS1Q5TC04 95 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 PWWP2BQ6NUJ5 590 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 TMEM220Q6QAJ8 160 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 MFSD7Q6UXD7 560 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 NPNTQ6UXI9 565 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 ZNF662Q6ZS27 426 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 PID1Q7Z2X4 250 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 GLT6D1Q7Z4J2 308 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 OOSP2Q86WS3 158 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 KATNAL2Q8IYT4 538 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 GALNT11Q8NCW6 608 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 OR2L2Q8NH16 312 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 ZNF398Q8TD17 642 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 CT55Q8WUE5 264 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 MRGPRX2Q96LB1 330 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 KIR3DX1Q9H7L2 352 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 BPIFA1Q9NP55 256 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 FGF21Q9NSA1 209 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 KCND1Q9NSA2 647 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 ABHD10Q9NUJ1 306 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 HRASLS2Q9NWW9 162 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 KLHL8Q9P2G9 620 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-212ENST00000492407 TLK1Q9UKI8 766 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 FARSAQ9Y285 508 aaKnown RBP8.92□□□□□ -0.98
HDAC3-212ENST00000492407 BTRCQ9Y297 605 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 MAN2B2Q9Y2E5 1009 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 EFR3BQ9Y2G0 817 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.92□□□□□ -0.98
HDAC3-212ENST00000492407 HEBP2Q9Y5Z4 205 aa8.92□□□□□ -0.98
HDAC3-212ENST00000492407 UBA6A0AVT1 1052 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-212ENST00000492407 STX7O15400 261 aaKnown RBP8.91□□□□□ -0.98
HDAC3-212ENST00000492407 MAP3K7O43318 606 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 SPOPO43791 374 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 UGT1A9O60656 530 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 SLC4A1P02730 911 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 KLK3P07288 261 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-212ENST00000492407 GSTM1P09488 218 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 FURINP09958 794 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 RALBP11234 206 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 UGT1A6P19224 532 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 NFKB1P19838 968 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 UGT1A1P22309 533 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 UGT1A4P22310 534 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 CTSCP53634 463 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 GEMP55040 296 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 COPS2P61201 443 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 DYNLT1P63172 113 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 GSTM4Q03013 218 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 LAMB3Q13751 1172 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 PLCL1Q15111 1095 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 TAF1AQ15573 450 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-212ENST00000492407 GPRC6AQ5T6X5 926 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 ITPRIPL1Q6GPH6 555 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 CAPRIN2Q6IMN6 1127 aaKnown RBP8.91□□□□□ -0.98
HDAC3-212ENST00000492407 ARMC6Q6NXE6 501 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 RANBP10Q6VN20 620 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 SPOCD1Q6ZMY3 1216 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 CNGA4Q8IV77 575 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 VSTM4Q8IW00 320 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 ZNF567Q8N184 647 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 BLOC1S5Q8TDH9 187 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 ULK4Q96C45 1275 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 RBM41Q96IZ5 413 aaKnown RBP8.91□□□□□ -0.98
HDAC3-212ENST00000492407 ELMO2Q96JJ3 720 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 QKIQ96PU8 341 aaKnown RBP eCLIP8.91□□□□□ -0.98
HDAC3-212ENST00000492407 PSMG3-AS1Q96PY0 264 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 MAP3K3Q99759 626 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 DPH2Q9BQC3 489 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-212ENST00000492407 FSD1LQ9BXM9 530 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 IQCGQ9H095 443 aaKnown RBP8.91□□□□□ -0.98
HDAC3-212ENST00000492407 ACTL8Q9H568 366 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 CXorf56Q9H5V9 222 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 UGT1A7Q9HAW7 530 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 UGT1A10Q9HAW8 530 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 UGT1A8Q9HAW9 530 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 C1GALT1Q9NS00 363 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 UBP1Q9NZI7 540 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 TRIM10Q9UDY6 481 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 SLC24A2Q9UI40 661 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 AAR2Q9Y312 384 aaKnown RBP8.91□□□□□ -0.98
HDAC3-212ENST00000492407 ALG6Q9Y672 507 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 PTPN13Q12923 2485 aa8.91□□□□□ -0.98
HDAC3-212ENST00000492407 NAV2Q8IVL1 2488 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 hCG_1818297A0A087WSY0 165 aa8.9□□□□□ -0.98
HDAC3-212ENST00000492407 APOC4-APOC2K7ER74 178 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms