RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 KIAA0754O94854 1291 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 TIAF1O95411 115 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 MT-ND3P03897 115 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 FURINP09958 794 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 TCN2P20062 427 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 MSH3P20585 1137 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 HADHAP40939 763 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 CASRP41180 1078 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 CD151P48509 253 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 SEPHS1P49903 392 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 VAV2P52735 878 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 HSD11B2P80365 405 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 NFKB2Q00653 900 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 FOXM1Q08050 763 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 PRPSAP1Q14558 356 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 PARP6Q2NL67 630 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 FNBP1LQ5T0N5 605 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 PWWP2BQ6NUJ5 590 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 IRGCQ6NXR0 463 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 AADACL2Q6P093 401 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 CYB5D1Q6P9G0 228 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 CLEC18BQ6UXF7 455 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 FAM92BQ6ZTR7 304 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 PPP1R3BQ86XI6 285 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 CLEC18CQ8NCF0 446 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 GALNT6Q8NCL4 622 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 SPDYE1Q8NFV5 336 aaPredicted RBP8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 OR13C4Q8NGS5 318 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 OR8K5Q8NH50 307 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 CCDC110Q8TBZ0 833 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 UBE2Q2Q8WVN8 375 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 ULK4Q96C45 1275 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 RMDN2Q96LZ7 410 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 LRFN5Q96NI6 719 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 MAP3K3Q99759 626 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 APOL2Q9BQE5 337 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 FERMT1Q9BQL6 677 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 GPR87Q9BY21 358 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 WWP1Q9H0M0 922 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 RBSNQ9H1K0 784 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 OR52A5Q9H2C5 316 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 ASB8Q9H765 288 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 AKIRIN1Q9H9L7 192 aaPredicted RBP8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 PDE7BQ9NP56 450 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 LHX9Q9NQ69 397 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 TRIM10Q9UDY6 481 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 FKBPLQ9UIM3 349 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 KCND3Q9UK17 655 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 CROTQ9UKG9 612 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 PADI1Q9ULC6 663 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 PSMD13Q9UNM6 376 aa8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 HEMK1Q9Y5R4 338 aaPredicted RBP8.17□□□□□ -1.1
SMARCB1-207ENST00000491967 USP9XQ93008 2570 aaPredicted RBP8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 CYSRT1A8MQ03 144 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 MIF4GDA9UHW6 222 aaKnown RBP8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 CREG1O75629 220 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 RASSF9O75901 435 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 STK10O94804 968 aaKnown RBP8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 METTL18O95568 372 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 ZBTB11O95625 1053 aaPredicted RBP8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 GSTM1P09488 218 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 ATP1B2P14415 290 aaPredicted RBP8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 NDUFS1P28331 727 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 DLSTP36957 453 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 KPNA2P52292 529 aaKnown RBP8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 TUBB4BP68371 445 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 GSTM4Q03013 218 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 ACY1Q03154 408 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 RPA4Q13156 261 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 TUBB3Q13509 450 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 TUBB2AQ13885 445 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 ZNF789Q5FWF6 425 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 ATP1A1-AS1Q5TC04 95 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 TCTN3Q6NUS6 607 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 DARS2Q6PI48 645 aaKnown RBP8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 CERS6Q6ZMG9 384 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 PRICKLE2Q7Z3G6 844 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 APLFQ8IW19 511 aaPredicted RBP8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 LILRA3Q8N6C8 439 aaPredicted RBP8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 TTC13Q8NBP0 860 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 SLC38A9Q8NBW4 561 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 HM13Q8TCT9 377 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 ZNF501Q96CX3 271 aaPredicted RBP8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 ABHD17AQ96GS6 310 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 CDKN2AIPNLQ96HQ2 116 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 HES6Q96HZ4 224 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 C12orf66Q96MD2 445 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 COPS8Q99627 209 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 TBL1YQ9BQ87 522 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 TUBB2BQ9BVA1 445 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 PITPNM3Q9BZ71 974 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 CHRNA10Q9GZZ6 450 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 ZMYND15Q9H091 742 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 TFB2MQ9H5Q4 396 aaKnown RBP8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 MLXIPLQ9NP71 852 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 FGF21Q9NSA1 209 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 NLE1Q9NVX2 485 aaPredicted RBP8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 WDR70Q9NW82 654 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 HRASLS2Q9NWW9 162 aa8.16□□□□□ -1.1
SMARCB1-207ENST00000491967 ZDHHC3Q9NYG2 299 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms