RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 PRR23BQ6ZRT6 265 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 RETREG3Q86VR2 466 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 PACRGLQ8N7B6 248 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 LEMD2Q8NC56 503 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 RAB2BQ8WUD1 216 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 JPH3Q8WXH2 748 aaPredicted RBP10.04□□□□□ -0.8
BRD9-209ENST00000490814 TTC9Q92623 222 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 HTRA1Q92743 480 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 SMARCD1Q96GM5 515 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 SLC39A13Q96H72 371 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 ZNF419Q96HQ0 510 aaPredicted RBP10.04□□□□□ -0.8
BRD9-209ENST00000490814 HBEGFQ99075 208 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 TMEM246Q9BRR3 403 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 CHID1Q9BWS9 393 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 SARS2Q9NP81 518 aaKnown RBP10.04□□□□□ -0.8
BRD9-209ENST00000490814 TMEM9Q9P0T7 183 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 RIMKLBQ9ULI2 386 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 C12orf71A8MTZ7 269 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 PQBP1O60828 265 aaKnown RBP10.04□□□□□ -0.8
BRD9-209ENST00000490814 ARCN1P48444 511 aaKnown RBP10.04□□□□□ -0.8
BRD9-209ENST00000490814 SERPINH1P50454 418 aaKnown RBP10.04□□□□□ -0.8
BRD9-209ENST00000490814 DSC2Q02487 901 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 ZNF792Q3KQV3 632 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 C6orf132Q5T0Z8 1188 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 FKBP9P1Q75LS8 142 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 ADCK1Q86TW2 530 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 MIER2Q8N344 545 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 CHCHD4Q8N4Q1 142 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 PDPRQ8NCN5 879 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 SLC22A8Q8TCC7 542 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 KCTD13Q8WZ19 329 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 CATSPERBQ9H7T0 1116 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 CD320Q9NPF0 282 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 COL1A2P08123 1366 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 SIP14410 1827 aa10.04□□□□□ -0.8
BRD9-209ENST00000490814 MYADML2A6NDP7 307 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 ERVH48-1M5A8F1 160 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 UBFD1O14562 309 aaKnown RBP10.03□□□□□ -0.8
BRD9-209ENST00000490814 SLC9A3R1O14745 358 aaPredicted RBP10.03□□□□□ -0.8
BRD9-209ENST00000490814 ARPC2O15144 300 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 CCNKO75909 580 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 PAHP00439 452 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 HLCSP50747 726 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 TMBIM6P55061 237 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 CDKN2DP55273 166 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 FOXA1P55317 472 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 CLCQ05315 142 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 SEMA3BQ13214 749 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 SNTA1Q13424 505 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 C2CD4AQ8NCU7 369 aaPredicted RBP10.03□□□□□ -0.8
BRD9-209ENST00000490814 TRPV3Q8NET8 790 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 SH3RF2Q8TEC5 729 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 SH3YL1Q96HL8 342 aaPredicted RBP10.03□□□□□ -0.8
BRD9-209ENST00000490814 TBATAQ96M53 351 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 UHRF1Q96T88 793 aaPredicted RBP10.03□□□□□ -0.8
BRD9-209ENST00000490814 CLSTN3Q9BQT9 956 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 IFT22Q9H7X7 185 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 AGPAT4Q9NRZ5 378 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 MRPL39Q9NYK5 338 aaKnown RBP10.03□□□□□ -0.8
BRD9-209ENST00000490814 MARCH4Q9P2E8 410 aaPredicted RBP10.03□□□□□ -0.8
BRD9-209ENST00000490814 BAG5Q9UL15 447 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 TESMINQ9Y4I5 508 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 LCTP09848 1927 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 PTGESO14684 152 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 THP07101 528 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 ALDOCP09972 364 aaKnown RBP10.03□□□□□ -0.8
BRD9-209ENST00000490814 CCL5P13501 91 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 ARSDP51689 593 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 CYBRD1Q53TN4 286 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 DENND5AQ6IQ26 1287 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 ZNF773Q6PK81 442 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 ALKAL1Q6UXT8 129 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 MIB1Q86YT6 1006 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 SLC22A9Q8IVM8 553 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 TWIST2Q8WVJ9 160 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 MRGPRX2Q96LB1 330 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 TMEM74Q96NL1 305 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 FCRL5Q96RD9 977 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 KCTD14Q9BQ13 255 aaPredicted RBP10.03□□□□□ -0.8
BRD9-209ENST00000490814 KCNN2Q9H2S1 579 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 ADPRHL2Q9NX46 363 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 ANAPC2Q9UJX6 822 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 RAD54BQ9Y620 910 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 PRRC2BQ5JSZ5 2229 aaKnown RBP10.03□□□□□ -0.8
BRD9-209ENST00000490814 DEAF1O75398 565 aaPredicted RBP10.03□□□□□ -0.8
BRD9-209ENST00000490814 RASAL1O95294 804 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 OR4Q2P0C623 313 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 MBL2P11226 248 aaPredicted RBP10.03□□□□□ -0.8
BRD9-209ENST00000490814 LHX1P48742 406 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 DIO3P55073 304 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 KCNK10P57789 538 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 VAC14Q08AM6 782 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 CDK10Q15131 360 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 ATP6AP1Q15904 470 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 DUSP28Q4G0W2 176 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 ARMC8Q8IUR7 673 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 PELI3Q8N2H9 469 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 SIMC1Q8NDZ2 872 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 OR13F1Q8NGS4 319 aa10.03□□□□□ -0.8
BRD9-209ENST00000490814 OR10Z1Q8NGY1 313 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms