RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 DNAJC28Q9NX36 388 aa13□□□□□ -0.33
SNX12-205ENST00000490561 SPASTQ9UBP0 616 aa13□□□□□ -0.33
SNX12-205ENST00000490561 SLCO1B1Q9Y6L6 691 aa13□□□□□ -0.33
SNX12-205ENST00000490561 THADAQ6YHU6 1953 aa13□□□□□ -0.33
SNX12-205ENST00000490561 ATXN2Q99700 1313 aaKnown RBP12.99□□□□□ -0.33
SNX12-205ENST00000490561 CCDC166P0CW27 439 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 ACP5P13686 325 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 CTSEP14091 401 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 SLC2A4P14672 509 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 JUNDP17535 347 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 CTSKP43235 329 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 SLC18A1P54219 525 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 MAGOHP61326 146 aaKnown RBP12.99□□□□□ -0.33
SNX12-205ENST00000490561 HSPA14Q0VDF9 509 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 SP140Q13342 867 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 ZNF460Q14592 562 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 ELOCQ15369 112 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 PLA2G4EQ3MJ16 856 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 TTMPQ5BVD1 217 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 METRNLQ641Q3 311 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 SH2D5Q6ZV89 423 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 RD3Q7Z3Z2 195 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 CLEC14AQ86T13 490 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 EXOC3L1Q86VI1 746 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 SPATS2Q86XZ4 545 aaKnown RBP12.99□□□□□ -0.33
SNX12-205ENST00000490561 CPNE9Q8IYJ1 553 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 SLC22A15Q8IZD6 547 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 GIMAP7Q8NHV1 300 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 FAM136AQ96C01 138 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 LINGO1Q96FE5 620 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 GALPQ9UBC7 116 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 APOBEC3BQ9UH17 382 aaKnown RBP12.99□□□□□ -0.33
SNX12-205ENST00000490561 MID2Q9UJV3 735 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 GRID1Q9ULK0 1009 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 SLC6A14Q9UN76 642 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 PRKAB1Q9Y478 270 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 A0A0C4DFX4 3053 aa12.99□□□□□ -0.33
SNX12-205ENST00000490561 TNRC6BQ9UPQ9 1833 aaKnown RBP12.98□□□□□ -0.33
SNX12-205ENST00000490561 A0A1B0GVT2 93 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 PRR19A6NJB7 356 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 GOLGA8RI6L899 631 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 IFRD1O00458 451 aaPredicted RBP12.98□□□□□ -0.33
SNX12-205ENST00000490561 SLC16A5O15375 505 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 PRPF4O43172 522 aaKnown RBP eCLIP12.98□□□□□ -0.334e-7■■□□□ 13.5
SNX12-205ENST00000490561 FUCA1P04066 466 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 RPN2P04844 631 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 C8GP07360 202 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 SYPP08247 313 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 RBP1P09455 135 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 SLC35G4P0C7Q5 338 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 BRAFP15056 766 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 RXRGP48443 463 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 ARRB1P49407 418 aaPredicted RBP12.98□□□□□ -0.33
SNX12-205ENST00000490561 CTBSQ01459 385 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 CSHL1Q14406 222 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 ACAP2Q15057 778 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 SEPT7Q16181 437 aaKnown RBP12.98□□□□□ -0.33
SNX12-205ENST00000490561 CCDC153Q494R4 210 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 ACSBG2Q5FVE4 666 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 PPM1JQ5JR12 505 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 SLC23A3Q6PIS1 610 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 WASH2PQ6VEQ5 465 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 ADAMTSL2Q86TH1 951 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 GKN2Q86XP6 184 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 C4orf33Q8N1A6 199 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 BANPQ8N9N5 519 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 GPBAR1Q8TDU6 330 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 NAT14Q8WUY8 206 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 EEF1AKMT1Q8WVE0 214 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 SLC30A3Q99726 388 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 TFB2MQ9H5Q4 396 aaKnown RBP12.98□□□□□ -0.33
SNX12-205ENST00000490561 WASH6PQ9NQA3 447 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 TMEM74BQ9NUR3 256 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 TMCO1Q9UM00 188 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 RUVBL2Q9Y230 463 aaKnown RBP12.98□□□□□ -0.33
SNX12-205ENST00000490561 R4GN57 208 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 DOCK9Q9BZ29 2069 aa12.98□□□□□ -0.33
SNX12-205ENST00000490561 PABPN1LA6NDY0 278 aaKnown RBP12.97□□□□□ -0.33
SNX12-205ENST00000490561 OR5K4A6NMS3 321 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 TM9SF1O15321 606 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 ZWINTO95229 277 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 CER1O95813 267 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 TSPAN12O95859 305 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 CFIP05156 583 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 ENO2P09104 434 aaPredicted RBP12.97□□□□□ -0.33
SNX12-205ENST00000490561 CD1DP15813 335 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 HALP42357 657 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 NFE2L1Q14494 772 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 ZNF423Q2M1K9 1284 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 KIF19Q2TAC6 998 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 KCTD16Q68DU8 428 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 LVRNQ6Q4G3 990 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 TMEM207Q6UWW9 146 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 LAYNQ6UX15 382 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 UNC5DQ6UXZ4 953 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 PDZD3Q86UT5 571 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 CENPLQ8N0S6 344 aaPredicted RBP12.97□□□□□ -0.33
SNX12-205ENST00000490561 ARFGAP2Q8N6H7 521 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 AVL9Q8NBF6 648 aa12.97□□□□□ -0.33
SNX12-205ENST00000490561 RHEBL1Q8TAI7 183 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms