RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 CEACAM20Q6UY09 585 aa11.53□□□□□ -0.56
SRSF4-204ENST00000489898 FAM92BQ6ZTR7 304 aa11.53□□□□□ -0.56
SRSF4-204ENST00000489898 SNX20Q7Z614 316 aa11.53□□□□□ -0.56
SRSF4-204ENST00000489898 PLXDC1Q8IUK5 500 aa11.53□□□□□ -0.56
SRSF4-204ENST00000489898 RBM12BQ8IXT5 1001 aaKnown RBP11.53□□□□□ -0.56
SRSF4-204ENST00000489898 NLGN4XQ8N0W4 816 aa11.53□□□□□ -0.56
SRSF4-204ENST00000489898 CLDN19Q8N6F1 224 aa11.53□□□□□ -0.56
SRSF4-204ENST00000489898 SPC24Q8NBT2 197 aa11.53□□□□□ -0.56
SRSF4-204ENST00000489898 NLGN4YQ8NFZ3 816 aaPredicted RBP11.53□□□□□ -0.56
SRSF4-204ENST00000489898 HM13Q8TCT9 377 aa11.53□□□□□ -0.56
SRSF4-204ENST00000489898 LKAAEAR1Q8TD35 194 aa11.53□□□□□ -0.56
SRSF4-204ENST00000489898 AHCYL2Q96HN2 611 aaKnown RBP11.53□□□□□ -0.56
SRSF4-204ENST00000489898 MAP3K3Q99759 626 aa11.53□□□□□ -0.56
SRSF4-204ENST00000489898 MENTQ9BUN1 341 aa11.53□□□□□ -0.56
SRSF4-204ENST00000489898 PITPNM3Q9BZ71 974 aa11.53□□□□□ -0.56
SRSF4-204ENST00000489898 ASPSCR1Q9BZE9 553 aa11.53□□□□□ -0.56
SRSF4-204ENST00000489898 ZCCHC2Q9C0B9 1178 aaKnown RBP11.53□□□□□ -0.56
SRSF4-204ENST00000489898 STN1Q9H668 368 aaKnown RBP11.53□□□□□ -0.56
SRSF4-204ENST00000489898 LUC7LQ9NQ29 371 aaKnown RBP11.53□□□□□ -0.56
SRSF4-204ENST00000489898 AMFRQ9UKV5 643 aa11.53□□□□□ -0.56
SRSF4-204ENST00000489898 USP9YO00507 2555 aaPredicted RBP11.52□□□□□ -0.56
SRSF4-204ENST00000489898 NKX2-8O15522 239 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 HCRTR1O43613 425 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 EBLN1P0CF75 366 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 TPH1P17752 444 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 PEBP1P30086 187 aaKnown RBP11.52□□□□□ -0.57
SRSF4-204ENST00000489898 GABRA4P48169 554 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 SEPHS1P49903 392 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 TMPRSS15P98073 1019 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 ABHD18Q0P651 414 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 ABRQ12979 859 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 SEMA5AQ13591 1074 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 GTF2H3Q13889 308 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 POU6F1Q14863 301 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 PARP6Q2NL67 630 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 P3H1Q32P28 736 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 CRTC2Q53ET0 693 aaPredicted RBP11.52□□□□□ -0.57
SRSF4-204ENST00000489898 MEI1Q5TIA1 1274 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 CCDC70Q6NSX1 233 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 FBXO38Q6PIJ6 1188 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 PACS1Q6VY07 963 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 KIAA1328Q86T90 577 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 SERPINA9Q86WD7 417 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 SLC13A5Q86YT5 568 aaPredicted RBP11.52□□□□□ -0.57
SRSF4-204ENST00000489898 D2HGDHQ8N465 521 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 SLC38A9Q8NBW4 561 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 GDAP1Q8TB36 358 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 CDKN2AIPNLQ96HQ2 116 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 OR6C1Q96RD1 312 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 TLR10Q9BXR5 811 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 LRRC40Q9H9A6 602 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 IMP3Q9NV31 184 aaKnown RBP11.52□□□□□ -0.57
SRSF4-204ENST00000489898 SLC2A6Q9UGQ3 507 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 FEZ2Q9UHY8 353 aaPredicted RBP11.52□□□□□ -0.57
SRSF4-204ENST00000489898 POMT2Q9UKY4 750 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 CDYLQ9Y232 598 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 BTRCQ9Y297 605 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 CPAMD8Q8IZJ3 1885 aa11.52□□□□□ -0.57
SRSF4-204ENST00000489898 CCDC78A2IDD5 438 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 CCDC162PA2VCL2 907 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 TLCD2A6NGC4 264 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 C2orf81A6NN90 581 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 BTN3A3O00478 584 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 ZW10O43264 779 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 ARNTP27540 789 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 ACADLP28330 430 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 AKT1P31749 480 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 PREPP48147 710 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 BIRC2Q13490 618 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 BOP1Q14137 746 aaKnown RBP11.51□□□□□ -0.57
SRSF4-204ENST00000489898 LONRF2Q1L5Z9 754 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.51□□□□□ -0.57
SRSF4-204ENST00000489898 CCDC38Q502W7 563 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 TMEM164Q5U3C3 297 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 ZNF385CQ66K41 422 aaPredicted RBP11.51□□□□□ -0.57
SRSF4-204ENST00000489898 PWWP2BQ6NUJ5 590 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 ZNF662Q6ZS27 426 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 TMEM135Q86UB9 458 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 TRIM48Q8IWZ4 208 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 TAB3Q8N5C8 712 aaPredicted RBP11.51□□□□□ -0.57
SRSF4-204ENST00000489898 GALNT6Q8NCL4 622 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 CCDC112Q8NEF3 446 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 OR52K1Q8NGK4 314 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 STARD8Q92502 1023 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 ZNF501Q96CX3 271 aaPredicted RBP11.51□□□□□ -0.57
SRSF4-204ENST00000489898 CXorf40BQ96DE9 158 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 ZNF514Q96K75 400 aaPredicted RBP11.51□□□□□ -0.57
SRSF4-204ENST00000489898 C12orf66Q96MD2 445 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 ZPBPQ9BS86 351 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 CASS4Q9NQ75 786 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 ZDHHC3Q9NYG2 299 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 AKAP7Q9P0M2 348 aaPredicted RBP11.51□□□□□ -0.57
SRSF4-204ENST00000489898 FAM8A1Q9UBU6 413 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 ICKQ9UPZ9 632 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 PCDHGA6Q9Y5G7 932 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 DOPEY2Q9Y3R5 2298 aa11.51□□□□□ -0.57
SRSF4-204ENST00000489898 C17orf113A0A1B0GUU1 675 aa11.5□□□□□ -0.57
SRSF4-204ENST00000489898 CYSRT1A8MQ03 144 aa11.5□□□□□ -0.57
SRSF4-204ENST00000489898 BHMG1C9JSJ3 638 aaPredicted RBP11.5□□□□□ -0.57
SRSF4-204ENST00000489898 K7EM74 188 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms