RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 ALDH18A1P54886 795 aaKnown RBP9.83□□□□□ -0.84
USP11-211ENST00000489111 KIAA1024LP59773 190 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 HERVK_113P63132 956 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 ZXDAP98168 799 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 PLOD1Q02809 727 aaPredicted RBP9.83□□□□□ -0.84
USP11-211ENST00000489111 SF3A3Q12874 501 aaKnown RBP eCLIP9.83□□□□□ -0.84
USP11-211ENST00000489111 FZD5Q13467 585 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 GBX1Q14549 363 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 KIAA0895LQ68EN5 471 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 UBE2R2Q712K3 238 aaPredicted RBP9.83□□□□□ -0.84
USP11-211ENST00000489111 SNX19Q92543 992 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 L3HYPDHQ96EM0 354 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 SPACA7Q96KW9 195 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 LINC00615Q96LM1 132 aaPredicted RBP9.83□□□□□ -0.84
USP11-211ENST00000489111 TMEM237Q96Q45 408 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 EGFL8Q99944 293 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 TRMOQ9BU70 441 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 APOOQ9BUR5 198 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 LGR4Q9BXB1 951 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 GPR174Q9BXC1 333 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 ERVK-6Q9BXR3 956 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 DRC3Q9H069 523 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 COG4Q9H9E3 785 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 EML4Q9HC35 981 aaKnown RBP9.83□□□□□ -0.84
USP11-211ENST00000489111 C2orf42Q9NWW7 574 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 UTP6Q9NYH9 597 aaKnown RBP9.83□□□□□ -0.84
USP11-211ENST00000489111 ZNHIT2Q9UHR6 403 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 MOSPD1Q9UJG1 213 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 DNAJC16Q9Y2G8 782 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 OARD1Q9Y530 152 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 UNC80Q8N2C7 3258 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 C17orf113A0A1B0GUU1 675 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 SLC5A10A0PJK1 596 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 KLHL33A6NCF5 533 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 MGAT4DA6NG13 374 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 TMEM202A6NGA9 273 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 STX16-NPEPL1H3BU86 382 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 STX16O14662 325 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 CHUKO15111 745 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 KMOO15229 486 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 SLC16A5O15375 505 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 GRID2O43424 1007 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 LATO43561 262 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 ITM2AO43736 263 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 SNX3O60493 162 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 LILRB5O75023 590 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 NDUFS2O75306 463 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 GPC4O75487 556 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 SUPT7LO94864 414 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 SLCO2B1O94956 709 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 TGDSO95455 350 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 CATP04040 527 aaKnown RBP9.82□□□□□ -0.84
USP11-211ENST00000489111 DCNP07585 359 aaKnown RBP9.82□□□□□ -0.84
USP11-211ENST00000489111 HIST1H2AGP0C0S8 130 aaPredicted RBP9.82□□□□□ -0.84
USP11-211ENST00000489111 MTHFD2P13995 350 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 HIST1H2ADP20671 130 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 IMPDH1P20839 514 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 MAP4P27816 1152 aaKnown RBP9.82□□□□□ -0.84
USP11-211ENST00000489111 HTR1BP28222 390 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 EEF1DP29692 281 aaKnown RBP9.82□□□□□ -0.84
USP11-211ENST00000489111 MAGEA9P43362 315 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 THOP1P52888 689 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 CLDN2P57739 230 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 NAA20P61599 178 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 MTAPQ13126 283 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 PRKAA1Q13131 559 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 TGFBIQ15582 683 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 PPP1R3AQ16821 1122 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 CES4AQ5XG92 561 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 SBSNQ6UWP8 590 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 FRMD7Q6ZUT3 714 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 AMZ2Q86W34 360 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 GALNT13Q8IUC8 556 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 VRK3Q8IV63 474 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 ZNF547Q8IVP9 402 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 CFAP206Q8IYR0 622 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 SLC22A15Q8IZD6 547 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 KIRREL3Q8IZU9 778 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 AFAP1L2Q8N4X5 818 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 CAMKK1Q8N5S9 505 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 OR6Y1Q8NGX8 325 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 OR2L2Q8NH16 312 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 MCOLN3Q8TDD5 553 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 THOC1Q96FV9 657 aaKnown RBP9.82□□□□□ -0.84
USP11-211ENST00000489111 SEC16BQ96JE7 1060 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 HIST1H2AHQ96KK5 128 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 CNDP1Q96KN2 507 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 HIST1H2AJQ99878 128 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 PLCD4Q9BRC7 762 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 H2AFJQ9BTM1 129 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 ILKAPQ9H0C8 392 aaPredicted RBP9.82□□□□□ -0.84
USP11-211ENST00000489111 C6orf106Q9H6K1 298 aaPredicted RBP9.82□□□□□ -0.84
USP11-211ENST00000489111 RMI1Q9H9A7 625 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 PARVBQ9HBI1 364 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 WSB2Q9NYS7 404 aaPredicted RBP9.82□□□□□ -0.84
USP11-211ENST00000489111 WWOXQ9NZC7 414 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 KLHL14Q9P2G3 628 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 MARCOQ9UEW3 520 aaPredicted RBP9.82□□□□□ -0.84
USP11-211ENST00000489111 ADAMTS6Q9UKP5 1117 aa9.82□□□□□ -0.84
USP11-211ENST00000489111 DMTF1Q9Y222 760 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms