RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 ANO7Q6IWH7 933 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 BZW1Q7L1Q6 419 aaKnown RBP8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 DSG4Q86SJ6 1040 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 RFX6Q8HWS3 928 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 LRRC49Q8IUZ0 686 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 GSPT2Q8IYD1 628 aaKnown RBP8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 KATNAL2Q8IYT4 538 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 BBS5Q8N3I7 341 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 SH2D3CQ8N5H7 860 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 ATPAF2Q8N5M1 289 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 OR52K2Q8NGK3 314 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 OR2T3Q8NH03 318 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 EXD1Q8NHP7 514 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 OR8D1Q8WZ84 308 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 RAPGEF5Q92565 580 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 PRCCQ92733 491 aaPredicted RBP8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 ALG14Q96F25 216 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 HMCESQ96FZ2 354 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 CELF6Q96J87 481 aaKnown RBP8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 PSMB7Q99436 277 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 NUSAP1Q9BXS6 441 aaKnown RBP8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 TMEM245Q9H330 911 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 KLHL11Q9NVR0 708 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 SLCO3A1Q9UIG8 710 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 CLCA2Q9UQC9 943 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 HS3ST2Q9Y278 367 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 PCDHB1Q9Y5F3 818 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 RAD54BQ9Y620 910 aa8.09□□□□□ -1.11
TRAPPC12-221ENST00000489032 ACACAQ13085 2346 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 THADAQ6YHU6 1953 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 A0A1W2PQF6 199 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 ANTXRLA6NF34 631 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 TTC34A8MYJ7 566 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 B5MCH6 92 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 DCLK1O15075 740 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 ZNF217O75362 1048 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 SLU7O95391 586 aaKnown RBP8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 DNTTP04053 509 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 CD48P09326 243 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 SRCP12931 536 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 CTNNA2P26232 953 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 CTNNA1P35221 906 aaKnown RBP8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 SERPINH1P50454 418 aaKnown RBP8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 PAPOLAP51003 745 aaKnown RBP8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 DNA2P51530 1060 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 ARSEP51690 589 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 RWDD2BP57060 319 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 TUBB4BP68371 445 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 ARF5P84085 180 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 ZBTB16Q05516 673 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 RAD51Q06609 339 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 IL10RBQ08334 325 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 HNRNPDQ14103 355 aaKnown RBP8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 ELAVL3Q14576 367 aaKnown RBP8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 RFTN1Q14699 578 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 FAM214AQ32MH5 1076 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 TTC31Q49AM3 519 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 USP39Q53GS9 565 aaKnown RBP8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 TFDP3Q5H9I0 405 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 FAM46CQ5VWP2 391 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 ZNF776Q68DI1 518 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 KIAA1324Q6UXG2 1013 aaKnown RBP8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 LINGO4Q6UY18 593 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 PIP4P1Q86T03 277 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 TMPRSS6Q8IU80 811 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 PCDH20Q8N6Y1 951 aaKnown RBP8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 ZNF366Q8N895 744 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 TRIM58Q8NG06 486 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 FAF2Q96CS3 445 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 SIPA1Q96FS4 1042 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 RNF157Q96PX1 679 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 TAAR9Q96RI9 348 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 BDH2Q9BUT1 245 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 SLC39A8Q9C0K1 460 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 GOLPH3Q9H4A6 298 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 LRRC19Q9H756 370 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 PRSS16Q9NQE7 514 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 UBA2Q9UBT2 640 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 TRIM10Q9UDY6 481 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 IPO11Q9UI26 975 aaKnown RBP8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 SCML1Q9UN30 329 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 RUVBL1Q9Y265 456 aaKnown RBP8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 NCKAP1Q9Y2A7 1128 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 PCDHA3Q9Y5H8 950 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 ACTL7AQ9Y615 435 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 SLC30A1Q9Y6M5 507 aa8.08□□□□□ -1.12
TRAPPC12-221ENST00000489032 MYO18AQ92614 2054 aaKnown RBP8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 URB1O60287 2271 aaKnown RBP8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 CTAGE9A4FU28 777 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 C1QTNF3-AMACRE9PGA6 284 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 ALOX15BO15296 676 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 GPR42O15529 346 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 PRAMEF11O60813 436 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 ZMPSTE24O75844 475 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 NEBLO76041 1014 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 URI1O94763 535 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 FTCDO95954 541 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 IGSF6O95976 241 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 IL4RP24394 825 aa8.07□□□□□ -1.12
TRAPPC12-221ENST00000489032 OXTRP30559 389 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms