RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 GAGE12BA1L429 117 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 TARSL2A2RTX5 802 aaKnown RBP3.34□□□□□ -1.87
PRPF4-203ENST00000488937 GAGE12HA6NDE8 117 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 FAM90A10PA6NDY2 464 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 TMEM247A6NEH6 219 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 ZSCAN5BA6NJL1 495 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 MARCH11A6NNE9 402 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 H0YIV9 168 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 TLR4O00206 839 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 E2F3O00716 465 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 PPEF2O14830 753 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 SSX5O60225 188 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 FCGR3BO75015 233 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 ATG13O75143 517 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 GLCEO94923 617 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 ZWINTO95229 277 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 GPANK1O95872 356 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 SERPING1P05155 500 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 EBLN1P0CF75 366 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 VPREB1P12018 145 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 TGM2P21980 687 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 HNRNPA2B1P22626 353 aaKnown RBP3.34□□□□□ -1.87
PRPF4-203ENST00000488937 GATA3P23771 443 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 NR2F2P24468 414 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 DNASE1P24855 282 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 CORO1AP31146 461 aaKnown RBP3.34□□□□□ -1.87
PRPF4-203ENST00000488937 HSPA1LP34931 641 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 SERPINB6P35237 376 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 SLC16A2P36021 539 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 ANP32AP39687 249 aaKnown RBP3.34□□□□□ -1.87
PRPF4-203ENST00000488937 ZNF84P51523 738 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 SUMO2P61956 95 aaKnown RBP3.34□□□□□ -1.87
PRPF4-203ENST00000488937 BLOC1S1P78537 153 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 HSD11B2P80365 405 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 SPIBQ01892 262 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 NHLH2Q02577 135 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 EGR4Q05215 589 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 KIF5AQ12840 1032 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 ABRQ12979 859 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 SPP2Q13103 211 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 TNK1Q13470 666 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 RAPSNQ13702 412 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 PDE7AQ13946 482 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 PLK5Q496M5 336 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 LRRC23Q53EV4 343 aaPredicted RBP3.34□□□□□ -1.87
PRPF4-203ENST00000488937 SP5Q6BEB4 398 aaPredicted RBP3.34□□□□□ -1.87
PRPF4-203ENST00000488937 OR6B2Q6IFH4 312 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 PLEKHA7Q6IQ23 1121 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 ANKRD16Q6P6B7 361 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 PODNL1Q6PEZ8 512 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 PAPD4Q6PIY7 484 aaKnown RBP3.34□□□□□ -1.87
PRPF4-203ENST00000488937 CES3Q6UWW8 571 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 LRIG3Q6UXM1 1119 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 DPY19L3Q6ZPD9 716 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 TOM1L2Q6ZVM7 507 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 GDF7Q7Z4P5 450 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 ADAMTSL2Q86TH1 951 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 IGFN1Q86VF2 1251 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 RFX6Q8HWS3 928 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 C4orf19Q8IY42 314 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 CFAP206Q8IYR0 622 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 CADM3Q8N126 398 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 LINC01465Q8N7H1 131 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 CCNYQ8ND76 341 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 STEAP2Q8NFT2 490 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 OR4N2Q8NGD1 307 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 OR8K5Q8NH50 307 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 OR14L1PQ8NHC6 308 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 GPT2Q8TD30 523 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 ELP5Q8TE02 316 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 GANCQ8TET4 914 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 WIPF2Q8TF74 440 aaPredicted RBP3.34□□□□□ -1.87
PRPF4-203ENST00000488937 HDAC7Q8WUI4 952 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 ATL1Q8WXF7 558 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 SLC9A6Q92581 669 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 NSMAFQ92636 917 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 AKAP1Q92667 903 aaKnown RBP eCLIP3.34□□□□□ -1.87
PRPF4-203ENST00000488937 RIT1Q92963 219 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 SNAPC3Q92966 411 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 NXNL1Q96CM4 212 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 CCDC51Q96ER9 411 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 SGF29Q96ES7 293 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 MYEOVQ96EZ4 313 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 RRNAD1Q96FB5 475 aaKnown RBP3.34□□□□□ -1.87
PRPF4-203ENST00000488937 SLC41A2Q96JW4 573 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 KLHL5Q96PQ7 755 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 BBS4Q96RK4 519 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 FAM110AQ9BQ89 295 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 ZSWIM1Q9BR11 485 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 CARD6Q9BX69 1037 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 NFKBIZQ9BYH8 718 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 ZNF768Q9H5H4 540 aaKnown RBP3.34□□□□□ -1.87
PRPF4-203ENST00000488937 RMND5AQ9H871 391 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 EPB41L5Q9HCM4 733 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 MGAT4CQ9UBM8 478 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 ZMAT5Q9UDW3 170 aaKnown RBP3.34□□□□□ -1.87
PRPF4-203ENST00000488937 IPO11Q9UI26 975 aaKnown RBP3.34□□□□□ -1.87
PRPF4-203ENST00000488937 CFAP45Q9UL16 551 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 VPS4AQ9UN37 437 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 GPR132Q9UNW8 380 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms