RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 COG4Q9H9E3 785 aa13.89□□□□□ -0.19
COL9A2-208ENST00000488463 OCIAD1Q9NX40 245 aa13.89□□□□□ -0.19
COL9A2-208ENST00000488463 FOXJ2Q9P0K8 574 aa13.89□□□□□ -0.19
COL9A2-208ENST00000488463 MARCH4Q9P2E8 410 aaPredicted RBP13.89□□□□□ -0.19
COL9A2-208ENST00000488463 CFAP20Q9Y6A4 193 aaKnown RBP13.89□□□□□ -0.19
COL9A2-208ENST00000488463 PRAMEF10O60809 474 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 PHF2O75151 1096 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 AVILO75366 819 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 AP2A2O94973 939 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 GAS8O95995 478 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 ANKRD34CP0C6C1 535 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 JMJD7P0C870 316 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 TYRP1P17643 537 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 MGAT1P26572 445 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 NMBRP28336 390 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 PDHA2P29803 388 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 HALP42357 657 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 NSG1P42857 185 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 FNTAP49354 379 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 VPS41P49754 854 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 CLN3Q13286 438 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 AFTPHQ6ULP2 937 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 CREG2Q8IUH2 290 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 CFAP206Q8IYR0 622 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 AGBL5Q8NDL9 886 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 PPHLN1Q8NEY8 458 aaKnown RBP13.88□□□□□ -0.19
COL9A2-208ENST00000488463 OR4L1Q8NH43 312 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 USP7Q93009 1102 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 CXorf40BQ96DE9 158 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 AHCYL2Q96HN2 611 aaKnown RBP13.88□□□□□ -0.19
COL9A2-208ENST00000488463 CCM2Q9BSQ5 444 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 DPH1Q9BZG8 443 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 IL22Q9GZX6 179 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 RAB33BQ9H082 229 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 PRORYQ9H606 182 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 MRM3Q9HC36 420 aaKnown RBP13.88□□□□□ -0.19
COL9A2-208ENST00000488463 SYBUQ9NX95 663 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 SIDT1Q9NXL6 827 aaKnown RBP13.88□□□□□ -0.19
COL9A2-208ENST00000488463 FAM8A1Q9UBU6 413 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 EPHA6Q9UF33 1036 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 PCDHGA3Q9Y5H0 932 aa13.88□□□□□ -0.19
COL9A2-208ENST00000488463 B4E171 279 aa13.87□□□□□ -0.19
COL9A2-208ENST00000488463 RRP8O43159 456 aaKnown RBP13.87□□□□□ -0.19
COL9A2-208ENST00000488463 POLBP06746 335 aa13.87□□□□□ -0.19
COL9A2-208ENST00000488463 TSPAN7P41732 249 aa13.87□□□□□ -0.19
COL9A2-208ENST00000488463 MAGEA3P43357 314 aa13.87□□□□□ -0.19
COL9A2-208ENST00000488463 ABCG1P45844 678 aa13.87□□□□□ -0.19
COL9A2-208ENST00000488463 MAPK9P45984 424 aa13.87□□□□□ -0.19
COL9A2-208ENST00000488463 LEPRP48357 1165 aaKnown RBP13.87□□□□□ -0.19
COL9A2-208ENST00000488463 MAPK10P53779 464 aa13.87□□□□□ -0.19
COL9A2-208ENST00000488463 PPP1CAP62136 330 aa13.87□□□□□ -0.19
COL9A2-208ENST00000488463 DTX1Q86Y01 620 aa13.87□□□□□ -0.19
COL9A2-208ENST00000488463 PLXDC1Q8IUK5 500 aa13.87□□□□□ -0.19
COL9A2-208ENST00000488463 AGGF1Q8N302 714 aaeCLIP13.87□□□□□ -0.19
COL9A2-208ENST00000488463 MPP5Q8N3R9 675 aa13.87□□□□□ -0.19
COL9A2-208ENST00000488463 ZFPM2Q8WW38 1151 aa13.87□□□□□ -0.19
COL9A2-208ENST00000488463 KCNE4Q8WWG9 221 aa13.87□□□□□ -0.19
COL9A2-208ENST00000488463 JPH3Q8WXH2 748 aaPredicted RBP13.87□□□□□ -0.19
COL9A2-208ENST00000488463 MFSD3Q96ES6 412 aa13.87□□□□□ -0.19
COL9A2-208ENST00000488463 NAF1Q96HR8 494 aaKnown RBP13.87□□□□□ -0.19
COL9A2-208ENST00000488463 C9orf72Q96LT7 481 aa13.87□□□□□ -0.19
COL9A2-208ENST00000488463 C12orf66Q96MD2 445 aa13.87□□□□□ -0.19
COL9A2-208ENST00000488463 SPRY4Q9C004 299 aa13.87□□□□□ -0.19
COL9A2-208ENST00000488463 KCND1Q9NSA2 647 aa13.87□□□□□ -0.19
COL9A2-208ENST00000488463 IMP3Q9NV31 184 aaKnown RBP13.87□□□□□ -0.19
COL9A2-208ENST00000488463 BFARQ9NZS9 450 aa13.87□□□□□ -0.19
COL9A2-208ENST00000488463 SEMA5BQ9P283 1151 aa13.87□□□□□ -0.19
COL9A2-208ENST00000488463 SLC5A10A0PJK1 596 aa13.86□□□□□ -0.19
COL9A2-208ENST00000488463 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.86□□□□□ -0.19
COL9A2-208ENST00000488463 AP3B1O00203 1094 aa13.86□□□□□ -0.19
COL9A2-208ENST00000488463 CAPN5O15484 640 aaPredicted RBP13.86□□□□□ -0.19
COL9A2-208ENST00000488463 EFSO43281 561 aa13.86□□□□□ -0.19
COL9A2-208ENST00000488463 KIF1CO43896 1103 aaKnown RBP13.86□□□□□ -0.19
COL9A2-208ENST00000488463 GSTM1P09488 218 aa13.86□□□□□ -0.19
COL9A2-208ENST00000488463 SLC35G4P0C7Q5 338 aa13.86□□□□□ -0.19
COL9A2-208ENST00000488463 TCP1P17987 556 aaKnown RBP13.86□□□□□ -0.19
COL9A2-208ENST00000488463 CSTF2P33240 577 aaKnown RBP eCLIP13.86□□□□□ -0.19
COL9A2-208ENST00000488463 PTGIRP43119 386 aa13.86□□□□□ -0.19
COL9A2-208ENST00000488463 PREPP48147 710 aa13.86□□□□□ -0.19
COL9A2-208ENST00000488463 ARCN1P48444 511 aaKnown RBP13.86□□□□□ -0.19
COL9A2-208ENST00000488463 GSTM4Q03013 218 aa13.86□□□□□ -0.19
COL9A2-208ENST00000488463 RPA4Q13156 261 aa13.86□□□□□ -0.19
COL9A2-208ENST00000488463 SOWAHCQ53LP3 525 aaPredicted RBP13.86□□□□□ -0.19
COL9A2-208ENST00000488463 SNAP47Q5SQN1 464 aa13.86□□□□□ -0.19
COL9A2-208ENST00000488463 LYPLAL1Q5VWZ2 237 aa13.86□□□□□ -0.19
COL9A2-208ENST00000488463 CES3Q6UWW8 571 aa13.86□□□□□ -0.19
COL9A2-208ENST00000488463 CERS6Q6ZMG9 384 aa13.86□□□□□ -0.19
COL9A2-208ENST00000488463 LDB1Q86U70 411 aaPredicted RBP13.86□□□□□ -0.19
COL9A2-208ENST00000488463 NAT8LQ8N9F0 302 aa13.86□□□□□ -0.19
COL9A2-208ENST00000488463 MCUQ8NE86 351 aa13.86□□□□□ -0.19
COL9A2-208ENST00000488463 OR6P1Q8NGX9 317 aa13.86□□□□□ -0.19
COL9A2-208ENST00000488463 SLCO2A1Q92959 643 aa13.86□□□□□ -0.19
COL9A2-208ENST00000488463 TAAR9Q96RI9 348 aa13.86□□□□□ -0.19
COL9A2-208ENST00000488463 NRTNQ99748 197 aa13.86□□□□□ -0.19
COL9A2-208ENST00000488463 TRIM56Q9BRZ2 755 aaKnown RBP13.86□□□□□ -0.19
COL9A2-208ENST00000488463 KIR3DX1Q9H7L2 352 aa13.86□□□□□ -0.19
COL9A2-208ENST00000488463 SLC24A2Q9UI40 661 aa13.86□□□□□ -0.19
COL9A2-208ENST00000488463 SOX13Q9UN79 622 aa13.86□□□□□ -0.19
COL9A2-208ENST00000488463 B3GALT1Q9Y5Z6 326 aa13.86□□□□□ -0.19
COL9A2-208ENST00000488463 A8MU76 341 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms