RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 MUC20Q8N307 709 aaPredicted RBP3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 GCSAMQ8N6F7 178 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 POMGNT2Q8NAT1 580 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 SLC38A9Q8NBW4 561 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 MCUQ8NE86 351 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 TMEM255BQ8WV15 326 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 LRRC59Q96AG4 307 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 PHF21AQ96BD5 680 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 HGH1Q9BTY7 390 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 KIFC3Q9BVG8 833 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 RTN4RQ9BZR6 473 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 RSPH9Q9H1X1 276 aaPredicted RBP3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 PANK3Q9H999 370 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 FKRPQ9H9S5 495 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 PDE7BQ9NP56 450 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 TCP11L1Q9NUJ3 509 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 ABCF3Q9NUQ8 709 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 TAS2R14Q9NYV8 317 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 CTNNA3Q9UI47 895 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 PPIEQ9UNP9 301 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 DLGAP4Q9Y2H0 992 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 CAMSAP2Q08AD1 1489 aa3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 RPRD2Q5VT52 1461 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 SCAF11Q99590 1463 aaKnown RBP3.73□□□□□ -1.81
ECHDC1-217ENST00000488087 THOC2Q8NI27 1593 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 E9PCH4 1651 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 NAIPQ13075 1403 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 EPRSP07814 1512 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 CUX1P39880 1505 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 ZCWPW2A0A1B0GU75 182 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 A0A1B0GUV1 79 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 A0A1W2PP11 408 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 A0A1W2PR77 199 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 EME2A4GXA9 379 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 ANKRD66B4E2M5 251 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 C16orf97H3BN30 126 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 EIF3DO15371 548 aaKnown RBP eCLIP3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 BUD23O43709 281 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 AVILO75366 819 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 ATP1A1P05023 1023 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 CETPP11597 493 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 SELLP14151 372 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 AMD1P17707 334 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 HSD17B4P51659 736 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 SUOXP51687 545 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 ARSEP51690 589 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 GSCP56915 257 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 MAP2K1Q02750 393 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 SPOCK1Q08629 439 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 PRPF4BQ13523 1007 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 BAATQ14032 418 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 ZKSCAN8Q15776 578 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 ZNF718Q3SXZ3 478 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 SPECC1Q5M775 1068 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 STXBP5Q5T5C0 1151 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 GARNL3Q5VVW2 1013 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 WBP2NLQ6ICG8 309 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 KCTD8Q6ZWB6 473 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 ATG9AQ7Z3C6 839 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 AACSQ86V21 672 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 KBTBD6Q86V97 674 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 CEP97Q8IW35 865 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 GBGT1Q8N5D6 347 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 C1orf52Q8N6N3 182 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 SYT2Q8N9I0 419 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 AVL9Q8NBF6 648 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 APPL2Q8NEU8 664 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 SLC22A18Q96BI1 424 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 LINGO1Q96FE5 620 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 OXNAD1Q96HP4 312 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 DACH2Q96NX9 599 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 PAFAH2Q99487 392 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 GFI1Q99684 422 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 POLR3CQ9BUI4 534 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 TXLNGYQ9BZA5 131 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 CHMP1AQ9HD42 196 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 TRMT1Q9NXH9 659 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 RCC2Q9P258 522 aaKnown RBP3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 KLHL9Q9P2J3 617 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 DNAJB4Q9UDY4 337 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 TSPYL4Q9UJ04 414 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 PLAGL1Q9UM63 463 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 KNSTRNQ9Y448 316 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 ZNF711Q9Y462 761 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 TMEM184BQ9Y519 407 aaPredicted RBP3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 TOP2BQ02880 1626 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 KANK1Q14678 1352 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 PARD3Q8TEW0 1356 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 PLEKHH1Q9ULM0 1364 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 TEX14Q8IWB6 1497 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 MBD5Q9P267 1494 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 SAMD9Q5K651 1589 aa3.72□□□□□ -1.81
ECHDC1-217ENST00000488087 PRAG1Q86YV5 1406 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 SHROOM2Q13796 1616 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 BIVM-ERCC5R4GMW8 1640 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 LNP1A1A4G5 178 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 PRSS44E7EML9 344 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 PLK4O00444 970 aa3.71□□□□□ -1.82
ECHDC1-217ENST00000488087 SH2B2O14492 632 aaPredicted RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 207.2 ms