RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 HSPB3Q12988 150 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 ZBTB17Q13105 803 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 SNTB1Q13884 538 aaKnown RBP3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 KRTAP24-1Q3LI83 254 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 SETMARQ53H47 684 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 FAM133BQ5BKY9 247 aaKnown RBP3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 GCNT6Q5T4J0 391 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 NDUFAF5Q5TEU4 345 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 KRT39Q6A163 491 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 FAM109BQ6ICB4 259 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 KLC3Q6P597 504 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 C16orf54Q6UWD8 224 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 GFRALQ6UXV0 394 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 ASB18Q6ZVZ8 466 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 FBXO39Q8N4B4 442 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 GBGT1Q8N5D6 347 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 CCDC191Q8NCU4 936 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 BBS10Q8TAM1 723 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 LNX1Q8TBB1 728 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 SLC20A1Q8WUM9 679 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 ATL1Q8WXF7 558 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 SMPDL3BQ92485 455 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 ABHD1Q96SE0 405 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 SPRY4Q9C004 299 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 GAREM1Q9H706 876 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 EVA1AQ9H8M9 152 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 PFDN4Q9NQP4 134 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 FAM118AQ9NWS6 357 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 WSB2Q9NYS7 404 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 OR2W1Q9Y3N9 320 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 CGNL1Q0VF96 1302 aa3.61□□□□□ -1.83
HMGB1P36-201ENST00000487709 SMTNL1A8MU46 457 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 PLK4O00444 970 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 ADAM20O43506 726 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 SYNGR3O43761 229 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 GGPS1O95749 300 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 TRUB2O95900 331 aaKnown RBP3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 LDLRP01130 860 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 AFPP02771 609 aaKnown RBP3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 KRT19P08727 400 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 ITGA2P17301 1181 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 CBLP22681 906 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 SLC9A3P48764 834 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 ISL1P61371 349 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 COASYQ13057 564 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 MELKQ14680 651 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 CBWD6Q4V339 395 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 CBWD3Q5JTY5 395 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 ERMARDQ5T6L9 678 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 ALS2CLQ60I27 953 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 FAM171BQ6P995 826 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 CLEC17AQ6ZS10 378 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 KCTD8Q6ZWB6 473 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 TMEM219Q86XT9 240 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 CEP97Q8IW35 865 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 GPALPP1Q8IXQ4 340 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 KCTD6Q8NC69 237 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 OR52I2Q8NH67 350 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 SPACA9Q96E40 222 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 LINGO1Q96FE5 620 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 FAM81BQ96LP2 452 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 POLR3CQ9BUI4 534 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 FNDC11Q9BVV2 318 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 SEMA6AQ9H2E6 1030 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 DDX31Q9H8H2 851 aaKnown RBP3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 UPF2Q9HAU5 1272 aaKnown RBP3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 MIOSQ9NXC5 875 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 SLC24A2Q9UI40 661 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 ANAPC2Q9UJX6 822 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 NME7Q9Y5B8 376 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 TAF1P21675 1872 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 ARHGEF40Q8TER5 1519 aa3.6□□□□□ -1.83
HMGB1P36-201ENST00000487709 A0A1B0GUV1 79 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 A0A1W2PP11 408 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 SRRM3A6NNA2 597 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 C16orf97H3BN30 126 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 CAPN9O14815 690 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 ADAMDEC1O15204 470 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 BUB3O43684 328 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 EIF5BO60841 1220 aaKnown RBP3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 BCL10O95999 233 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 FYNP06241 537 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 PFKFB1P16118 471 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 PCGF2P35227 344 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 MTHFRP42898 656 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 PDLIM4P50479 330 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 PSMC6P62333 389 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 SPOCK1Q08629 439 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 ALCAMQ13740 583 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 DUOXA1Q1HG43 343 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 MRGPRG-AS1Q2M3A8 158 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 LETM2Q2VYF4 491 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 SIRPB2Q5JXA9 342 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 ARMC4Q5T2S8 1044 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 CST9LP1Q5W188 147 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 WBP2NLQ6ICG8 309 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 TMEM211Q6ICI0 200 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 GDPD4Q6W3E5 623 aa3.59□□□□□ -1.83
HMGB1P36-201ENST00000487709 CHST3Q7LGC8 479 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms