RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 OR6C74A6NCV1 312 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 OR5K3A6NET4 321 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 CSRP3P50461 194 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 PPP1CAP62136 330 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 XIAPP98170 497 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 ACY1Q03154 408 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 TUBB3Q13509 450 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 SEPT6Q14141 434 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 PARP6Q2NL67 630 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 CRTC2Q53ET0 693 aaPredicted RBP12.16□□□□□ -0.46
SREBF1-215ENST00000487401 ZNF449Q6P9G9 518 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 SNX20Q7Z614 316 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 BPHLQ86WA6 291 aaPredicted RBP12.16□□□□□ -0.46
SREBF1-215ENST00000487401 OOSP2Q86WS3 158 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 PTRH1Q86Y79 214 aaKnown RBP12.16□□□□□ -0.46
SREBF1-215ENST00000487401 KMT5CQ86Y97 462 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 SYCE1Q8N0S2 351 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 LRRC57Q8N9N7 239 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 FAM71DQ8N9W8 422 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 ACRBPQ8NEB7 543 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 OR13C4Q8NGS5 318 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 NAT14Q8WUY8 206 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 ALG3Q92685 438 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 SLC41A2Q96JW4 573 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 LINC00615Q96LM1 132 aaPredicted RBP12.16□□□□□ -0.46
SREBF1-215ENST00000487401 ALS2CR12Q96Q35 445 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 MAP3K3Q99759 626 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 BAG1Q99933 345 aaPredicted RBP12.16□□□□□ -0.46
SREBF1-215ENST00000487401 CCM2Q9BSQ5 444 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 TRIM4Q9C037 500 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 SEMA5BQ9P283 1151 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 KCND3Q9UK17 655 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 HEBP2Q9Y5Z4 205 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 MRPS18BQ9Y676 258 aaKnown RBP12.16□□□□□ -0.46
SREBF1-215ENST00000487401 KIF26BQ2KJY2 2108 aa12.16□□□□□ -0.46
SREBF1-215ENST00000487401 UNC13CQ8NB66 2214 aa12.15□□□□□ -0.46
SREBF1-215ENST00000487401 PIPSLA2A3N6 862 aa12.15□□□□□ -0.46
SREBF1-215ENST00000487401 ATP1B2P14415 290 aaPredicted RBP12.15□□□□□ -0.46
SREBF1-215ENST00000487401 FOLR1P15328 257 aa12.15□□□□□ -0.46
SREBF1-215ENST00000487401 F8A1P23610 371 aa12.15□□□□□ -0.46
SREBF1-215ENST00000487401 NDUFS1P28331 727 aa12.15□□□□□ -0.46
SREBF1-215ENST00000487401 OAS2P29728 719 aaKnown RBP12.15□□□□□ -0.46
SREBF1-215ENST00000487401 ZNF140P52738 457 aaPredicted RBP12.15□□□□□ -0.46
SREBF1-215ENST00000487401 HSD11B2P80365 405 aa12.15□□□□□ -0.46
SREBF1-215ENST00000487401 KIF5AQ12840 1032 aa12.15□□□□□ -0.46
SREBF1-215ENST00000487401 PRKAA1Q13131 559 aa12.15□□□□□ -0.46
SREBF1-215ENST00000487401 KCNAB1Q14722 419 aa12.15□□□□□ -0.46
SREBF1-215ENST00000487401 GPR33Q49SQ1 333 aa12.15□□□□□ -0.46
SREBF1-215ENST00000487401 ZRANB3Q5FWF4 1079 aa12.15□□□□□ -0.46
SREBF1-215ENST00000487401 TMTC4Q5T4D3 741 aa12.15□□□□□ -0.46
SREBF1-215ENST00000487401 ATP1A1-AS1Q5TC04 95 aa12.15□□□□□ -0.46
SREBF1-215ENST00000487401 DENND5AQ6IQ26 1287 aa12.15□□□□□ -0.46
SREBF1-215ENST00000487401 DUS1LQ6P1R4 473 aaKnown RBP12.15□□□□□ -0.46
SREBF1-215ENST00000487401 TAS2R42Q7RTR8 314 aa12.15□□□□□ -0.46
SREBF1-215ENST00000487401 NXPE1Q8N323 547 aa12.15□□□□□ -0.46
SREBF1-215ENST00000487401 SPDYE1Q8NFV5 336 aaPredicted RBP12.15□□□□□ -0.46
SREBF1-215ENST00000487401 C9orf43Q8TAL5 461 aaPredicted RBP12.15□□□□□ -0.46
SREBF1-215ENST00000487401 HM13Q8TCT9 377 aa12.15□□□□□ -0.46
SREBF1-215ENST00000487401 FCRL4Q96PJ5 515 aa12.15□□□□□ -0.46
SREBF1-215ENST00000487401 C19orf43Q9BQ61 176 aa12.15□□□□□ -0.46
SREBF1-215ENST00000487401 VPS37BQ9H9H4 285 aa12.15□□□□□ -0.46
SREBF1-215ENST00000487401 ARNT2Q9HBZ2 717 aa12.15□□□□□ -0.46
SREBF1-215ENST00000487401 SLC24A2Q9UI40 661 aa12.15□□□□□ -0.46
SREBF1-215ENST00000487401 SHROOM3Q8TF72 1996 aa12.14□□□□□ -0.47
SREBF1-215ENST00000487401 TLCD2A6NGC4 264 aa12.14□□□□□ -0.47
SREBF1-215ENST00000487401 MIF4GDA9UHW6 222 aaKnown RBP12.14□□□□□ -0.47
SREBF1-215ENST00000487401 IFRD1O00458 451 aaPredicted RBP12.14□□□□□ -0.47
SREBF1-215ENST00000487401 CCL22O00626 93 aa12.14□□□□□ -0.47
SREBF1-215ENST00000487401 TERTO14746 1132 aaKnown RBP12.14□□□□□ -0.47
SREBF1-215ENST00000487401 PSMD3O43242 534 aa12.14□□□□□ -0.47
SREBF1-215ENST00000487401 SGTAO43765 313 aa12.14□□□□□ -0.47
SREBF1-215ENST00000487401 EBLN1P0CF75 366 aa12.14□□□□□ -0.47
SREBF1-215ENST00000487401 TPH1P17752 444 aa12.14□□□□□ -0.47
SREBF1-215ENST00000487401 MC4RP32245 332 aa12.14□□□□□ -0.47
SREBF1-215ENST00000487401 MSLNQ13421 630 aaPredicted RBP12.14□□□□□ -0.47
SREBF1-215ENST00000487401 ERV3-1Q14264 604 aa12.14□□□□□ -0.47
SREBF1-215ENST00000487401 CAPRIN2Q6IMN6 1127 aaKnown RBP12.14□□□□□ -0.47
SREBF1-215ENST00000487401 PWWP2BQ6NUJ5 590 aa12.14□□□□□ -0.47
SREBF1-215ENST00000487401 D2HGDHQ8N465 521 aa12.14□□□□□ -0.47
SREBF1-215ENST00000487401 OR4E2Q8NGC2 313 aa12.14□□□□□ -0.47
SREBF1-215ENST00000487401 DNAJC1Q96KC8 554 aaKnown RBP12.14□□□□□ -0.47
SREBF1-215ENST00000487401 RMDN2Q96LZ7 410 aa12.14□□□□□ -0.47
SREBF1-215ENST00000487401 FERD3LQ96RJ6 166 aa12.14□□□□□ -0.47
SREBF1-215ENST00000487401 TWSG1Q9GZX9 223 aa12.14□□□□□ -0.47
SREBF1-215ENST00000487401 KIR3DX1Q9H7L2 352 aa12.14□□□□□ -0.47
SREBF1-215ENST00000487401 LRRC40Q9H9A6 602 aa12.14□□□□□ -0.47
SREBF1-215ENST00000487401 LHX9Q9NQ69 397 aa12.14□□□□□ -0.47
SREBF1-215ENST00000487401 ZNF71Q9NQZ8 489 aaPredicted RBP12.14□□□□□ -0.47
SREBF1-215ENST00000487401 FGF21Q9NSA1 209 aa12.14□□□□□ -0.47
SREBF1-215ENST00000487401 SOHLH2Q9NX45 425 aa12.14□□□□□ -0.47
SREBF1-215ENST00000487401 ZDHHC3Q9NYG2 299 aa12.14□□□□□ -0.47
SREBF1-215ENST00000487401 C17orf113A0A1B0GUU1 675 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 CDC14CA4D256 554 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 GOLGA6L3A6NEY3 463 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 AGAP14A8MT82 685 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 C21orf140B9A014 251 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 MAP3K7O43318 606 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 LDB2O43679 373 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 TIAF1O95411 115 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 ZBTB11O95625 1053 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms