RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 NHSL1Q5SYE7 1610 aa4.85□□□□□ -1.63
PRPF38A-203ENST00000487160 GCC2Q8IWJ2 1684 aa4.85□□□□□ -1.63
PRPF38A-203ENST00000487160 EVPLQ92817 2033 aa4.85□□□□□ -1.63
PRPF38A-203ENST00000487160 CROCC2H7BZ55 1655 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 MAST1Q9Y2H9 1570 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 EFCAB6Q5THR3 1501 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 FGD6Q6ZV73 1430 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 A0A1W2PP11 408 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 PLK4O00444 970 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 MID1O15344 667 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 IPO8O15397 1037 aaKnown RBP4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 ZNF12P17014 697 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 S1PR1P21453 382 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 GABRA5P31644 462 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 MC5RP33032 325 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 CSE1LP55060 971 aaKnown RBP4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 COG7P83436 770 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 MYBPHQ13203 477 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 CAMK2DQ13557 499 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 HLFQ16534 295 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 CALCRLQ16602 461 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 ZNF772Q68DY9 489 aaPredicted RBP4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 SLFN11Q7Z7L1 901 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 MAP7D3Q8IWC1 876 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 ZNF114Q8NC26 417 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 SMRP1Q8NCR6 262 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 TSPAN14Q8NG11 270 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 OR10S1Q8NGN2 331 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 SPATA22Q8NHS9 363 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 TANKQ92844 425 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 MIB2Q96AX9 1013 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 LINC00615Q96LM1 132 aaPredicted RBP4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 ST6GALNAC4Q9H4F1 302 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 RCC2Q9P258 522 aaKnown RBP4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 OSGIN1Q9UJX0 560 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 KCNS2Q9ULS6 477 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 NFS1Q9Y697 457 aa4.84□□□□□ -1.63
PRPF38A-203ENST00000487160 LRP5O75197 1615 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 MSH6P52701 1360 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 CACNA1IQ9P0X4 2223 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 ASTN2O75129 1339 aaPredicted RBP4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 ZNF541Q9H0D2 1346 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 CLEC18AA5D8T8 446 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 MYMKA6NI61 221 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 PRAMEF11O60813 436 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 C22orf31O95567 290 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 TRUB2O95900 331 aaKnown RBP4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 PEX5P50542 639 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 ZNF41P51814 821 aaPredicted RBP4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 CTSCP53634 463 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 SNRPEP62304 92 aaKnown RBP4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 MELKQ14680 651 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 FAM47EQ6ZV65 393 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 CHST3Q7LGC8 479 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 ANKRD23Q86SG2 305 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 ADHFE1Q8IWW8 467 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 FBXL14Q8N1E6 418 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 NKAIN3Q8N8D7 197 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 CLEC18CQ8NCF0 446 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 ZFAND2BQ8WV99 257 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 SMG7Q92540 1137 aaKnown RBP4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 ABTB1Q969K4 478 aaPredicted RBP4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 PIGTQ969N2 578 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 ERLEC1Q96DZ1 483 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 SPACA9Q96E40 222 aaPredicted RBP4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 NEK1Q96PY6 1258 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 SLC22A12Q96S37 553 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 NTPCRQ9BSD7 190 aaKnown RBP4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 SEMA6AQ9H2E6 1030 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 OPA3Q9H6K4 179 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 KLHL9Q9P2J3 617 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 DDX25Q9UHL0 483 aaKnown RBP4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 AMDHD2Q9Y303 409 aa4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 MARF1Q9Y4F3 1742 aaKnown RBP4.83□□□□□ -1.64
PRPF38A-203ENST00000487160 ADGRB3O60242 1522 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 MTUS2Q5JR59 1369 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 A0A0B4J293 547 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 EDDM13A0A1B0GTR0 161 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 FAM90A10PA6NDY2 464 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 SLCO2B1O94956 709 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 ACAA1P09110 424 aaPredicted RBP4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 LINC00271P0C7V0 271 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 CDK4P11802 303 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 MYOD1P15172 320 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 PFKFB1P16118 471 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 TMPOP42166 694 aaKnown RBP4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 ISL1P61371 349 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 ROR1Q01973 937 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 RALGDSQ12967 914 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 ALDH1L2Q3SY69 923 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 AWAT2Q6E213 333 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 FAM122CQ6P4D5 195 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 FIGLAQ6QHK4 219 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 IL27RAQ6UWB1 636 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 RBPMS2Q6ZRY4 209 aaKnown RBP4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 IQCHQ86VS3 1027 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 ZNF595Q8IYB9 648 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 RNF113BQ8IZP6 322 aaKnown RBP4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 C1orf87Q8N0U7 546 aa4.82□□□□□ -1.64
PRPF38A-203ENST00000487160 XXYLT1Q8NBI6 393 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms