RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 NTSR1P30989 418 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 CTHP32929 405 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 ACADVLP49748 655 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 RAP1GDS1P52306 607 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 CDH13P55290 713 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 MRPS21P82921 87 aaKnown RBP11.42□□□□□ -0.58
PRKCB-207ENST00000486868 CNTN1Q12860 1018 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 UBAP2LQ14157 1087 aaKnown RBP11.42□□□□□ -0.58
PRKCB-207ENST00000486868 SQLEQ14534 574 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 MAPRE2Q15555 327 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 ZRSR2Q15696 482 aaKnown RBP11.42□□□□□ -0.58
PRKCB-207ENST00000486868 CST6Q15828 149 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 PDCD2Q16342 344 aaPredicted RBP11.42□□□□□ -0.58
PRKCB-207ENST00000486868 SMU1Q2TAY7 513 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 ZNF658BQ4V348 819 aaPredicted RBP11.42□□□□□ -0.58
PRKCB-207ENST00000486868 WASHC2DQ5SRD0 308 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 SDE2Q6IQ49 451 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 OGFOD2Q6N063 350 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 CYB5D1Q6P9G0 228 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 GPRIN3Q6ZVF9 776 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 KLHDC8AQ8IYD2 350 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 CHPFQ8IZ52 775 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 MCOLN3Q8TDD5 553 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 TRPC4APQ8TEL6 797 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 TWIST2Q8WVJ9 160 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 ASB12Q8WXK4 309 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 C19orf60Q96EN9 201 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 NTMT1Q9BV86 223 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 CADM1Q9BY67 442 aaKnown RBP11.42□□□□□ -0.58
PRKCB-207ENST00000486868 CD244Q9BZW8 370 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 TNFRSF12AQ9NP84 129 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 NDE1Q9NXR1 346 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 CACNA2D2Q9NY47 1150 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 DNAJC15Q9Y5T4 150 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 COL4A3Q01955 1670 aa11.42□□□□□ -0.58
PRKCB-207ENST00000486868 K7EPI3 171 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 NEMP1O14524 444 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 UBDO15205 165 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 TAPBPO15533 448 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 DCXO43602 365 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 KATNA1O75449 491 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 PSIP1O75475 530 aaKnown RBP11.41□□□□□ -0.58
PRKCB-207ENST00000486868 MATN4O95460 622 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 SOD1P00441 154 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 HIST1H2AGP0C0S8 130 aaPredicted RBP11.41□□□□□ -0.58
PRKCB-207ENST00000486868 PRR35P0CG20 571 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 COX4I1P13073 169 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 HIST1H2ADP20671 130 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 PIK3R1P27986 724 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 DRD3P35462 400 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 GPR1P46091 355 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 PSMD8P48556 350 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 RPIAP49247 311 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 AGTR2P50052 363 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 PCDH1Q08174 1060 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 GTF2H2Q13888 395 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 GTF2H3Q13889 308 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 STARD3Q14849 445 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 MAP7D1Q3KQU3 841 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 FBXO43Q4G163 708 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 TMEM196Q5HYL7 178 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 AGBL4Q5VU57 503 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 NAIF1Q69YI7 327 aaPredicted RBP11.41□□□□□ -0.58
PRKCB-207ENST00000486868 GTF2H2CQ6P1K8 395 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 NEK5Q6P3R8 708 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 LRRC70Q7Z2Q7 622 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 SPATA19Q7Z5L4 167 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 SPNS2Q8IVW8 549 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 SFTPA1Q8IWL2 248 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 KIF2BQ8N4N8 673 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 RASGEF1AQ8N9B8 481 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 AGR3Q8TD06 166 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 MAGEC3Q8TD91 643 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 TSPEARQ8WU66 669 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 ATL1Q8WXF7 558 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 ELMO1Q92556 727 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 DLG3Q92796 817 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 UTP4Q969X6 686 aaKnown RBP11.41□□□□□ -0.58
PRKCB-207ENST00000486868 COX14Q96I36 57 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 HIST1H2AHQ96KK5 128 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 NSUN5Q96P11 429 aaKnown RBP11.41□□□□□ -0.58
PRKCB-207ENST00000486868 ACOX2Q99424 681 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 HIST1H2AJQ99878 128 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 H2AFJQ9BTM1 129 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 SHCBP1LQ9BZQ2 653 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 FBRSL1Q9HCM7 1045 aaKnown RBP11.41□□□□□ -0.58
PRKCB-207ENST00000486868 ACSS2Q9NR19 701 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 KLC4Q9NSK0 619 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 PDE10AQ9Y233 779 aa11.41□□□□□ -0.58
PRKCB-207ENST00000486868 DENND4AQ7Z401 1863 aa11.4□□□□□ -0.58
PRKCB-207ENST00000486868 PABPN1LA6NDY0 278 aaKnown RBP11.4□□□□□ -0.58
PRKCB-207ENST00000486868 LRRC14BA6NHZ5 514 aa11.4□□□□□ -0.58
PRKCB-207ENST00000486868 TMEM233B4DJY2 109 aa11.4□□□□□ -0.58
PRKCB-207ENST00000486868 MMP20O60882 483 aa11.4□□□□□ -0.58
PRKCB-207ENST00000486868 LILRB5O75023 590 aa11.4□□□□□ -0.58
PRKCB-207ENST00000486868 CRCPO75575 148 aa11.4□□□□□ -0.58
PRKCB-207ENST00000486868 STK16O75716 305 aa11.4□□□□□ -0.58
PRKCB-207ENST00000486868 TM7SF2O76062 418 aa11.4□□□□□ -0.58
PRKCB-207ENST00000486868 JUNP05412 331 aaKnown RBP11.4□□□□□ -0.58
PRKCB-207ENST00000486868 EBLN1P0CF75 366 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms