RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 ZDHHC17Q8IUH5 632 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 VSTM4Q8IW00 320 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 CLEC4FQ8N1N0 589 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 RIBC1Q8N443 379 aaPredicted RBP5.41□□□□□ -1.54
COPS3-209ENST00000486810 ANKRD13CQ8N6S4 541 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 AVL9Q8NBF6 648 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 C11orf65Q8NCR3 313 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 CCDC197Q8NCU1 140 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 GRPEL2Q8TAA5 225 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 CEP76Q8TAP6 659 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 DEPDC1BQ8WUY9 529 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 UCMAQ8WVF2 138 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 KCTD4Q8WVF5 259 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 DPF1Q92782 380 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 INPP5DQ92835 1189 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 BORCS5Q969J3 196 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 GJA10Q969M2 543 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 PTERQ96BW5 349 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 CTHRC1Q96CG8 243 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 ZNF845Q96IR2 970 aaPredicted RBP5.41□□□□□ -1.54
COPS3-209ENST00000486810 AK8Q96MA6 479 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 ZNF641Q96N77 438 aaPredicted RBP5.41□□□□□ -1.54
COPS3-209ENST00000486810 TMEM237Q96Q45 408 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 SLC26A6Q9BXS9 759 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 TDRD1Q9BXT4 1180 aaKnown RBP5.41□□□□□ -1.54
COPS3-209ENST00000486810 TWSG1Q9GZX9 223 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 HOXD1Q9GZZ0 328 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 DDX47Q9H0S4 455 aaKnown RBP5.41□□□□□ -1.54
COPS3-209ENST00000486810 PNPLA8Q9NP80 782 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 TRMT13Q9NUP7 481 aaKnown RBP5.41□□□□□ -1.54
COPS3-209ENST00000486810 TXLNGQ9NUQ3 528 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 DDX19AQ9NUU7 478 aaKnown RBP5.41□□□□□ -1.54
COPS3-209ENST00000486810 PLK2Q9NYY3 685 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 KLHL9Q9P2J3 617 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 ANKMY1Q9P2S6 941 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 ADAMTS5Q9UNA0 930 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 DRG1Q9Y295 367 aaKnown RBP5.41□□□□□ -1.54
COPS3-209ENST00000486810 SNX13Q9Y5W8 968 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 WNT6Q9Y6F9 365 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 MYH11P35749 1972 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 MROH7-TTC4A0A0A0MT08 1334 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 PASKQ96RG2 1323 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 SMARCA4P51532 1647 aa5.41□□□□□ -1.54
COPS3-209ENST00000486810 KDM6AO15550 1401 aaPredicted RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 ZNF879B4DU55 563 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 H7C0S8 307 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 DDX39AO00148 427 aaKnown RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 VILLO15195 856 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 CASC3O15234 703 aaKnown RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 CCDC22O60826 627 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 SURF6O75683 361 aaKnown RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 PIAS2O75928 621 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 IL18RAPO95256 599 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 SNAP29O95721 258 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 ANXA2P07355 339 aaKnown RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 SLC3A2P08195 630 aaKnown RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 SERPINF2P08697 491 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 CLUP10909 449 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 GNSP15586 552 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 ZNF37AP17032 561 aaPredicted RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 RAB4AP20338 218 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 BMI1P35226 326 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 RCVRNP35243 200 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 ALDH3A2P51648 485 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 PSMD4P55036 377 aaKnown RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 NUP107P57740 925 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 GNG11P61952 73 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 YWHAEP62258 255 aaKnown RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 RPL10AP62906 217 aaKnown RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 ASIC1P78348 528 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 PSG6Q00889 435 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 E2F1Q01094 437 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 CEBPZQ03701 1054 aaKnown RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 BFSP1Q12934 665 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 CALCOCO2Q13137 446 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 PMS2P3Q13401 168 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 FHL3Q13643 280 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 RCN2Q14257 317 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 CAPRIN1Q14444 709 aaKnown RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 RRS1Q15050 365 aaKnown RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 LRRC36Q1X8D7 754 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 ALG11Q2TAA5 492 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 ADCK5Q3MIX3 580 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 RNASE12Q5GAN4 147 aaKnown RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 CENPPQ6IPU0 288 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 NAPRTQ6XQN6 538 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 ZNF852Q6ZMS4 543 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 TRIM72Q6ZMU5 477 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 TMTC3Q6ZXV5 915 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 GSTA5Q7RTV2 222 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 HDDC2Q7Z4H3 204 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 PIGWQ7Z7B1 504 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 NEK8Q86SG6 692 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 CDKL3Q8IVW4 592 aaPredicted RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 YAF2Q8IY57 180 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 RCOR2Q8IZ40 523 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 ADGRF2Q8IZF7 708 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 MAML2Q8IZL2 1156 aaPredicted RBP5.4□□□□□ -1.54
COPS3-209ENST00000486810 TCP10LQ8TDR4 215 aa5.4□□□□□ -1.54
COPS3-209ENST00000486810 PIGOQ8TEQ8 1089 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms