RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 SYPP08247 313 aa13.63□□□□□ -0.23
NELFCD-209ENST00000486263 PYGBP11216 843 aa13.63□□□□□ -0.23
NELFCD-209ENST00000486263 SDHBP21912 280 aa13.63□□□□□ -0.23
NELFCD-209ENST00000486263 CLCN7P51798 805 aa13.63□□□□□ -0.23
NELFCD-209ENST00000486263 ZNF460Q14592 562 aa13.63□□□□□ -0.23
NELFCD-209ENST00000486263 TCEA2Q15560 299 aa13.63□□□□□ -0.23
NELFCD-209ENST00000486263 AGBL2Q5U5Z8 902 aa13.63□□□□□ -0.23
NELFCD-209ENST00000486263 PEAR1Q5VY43 1037 aaPredicted RBP13.63□□□□□ -0.23
NELFCD-209ENST00000486263 PAQR3Q6TCH7 311 aa13.63□□□□□ -0.23
NELFCD-209ENST00000486263 NAPRTQ6XQN6 538 aa13.63□□□□□ -0.23
NELFCD-209ENST00000486263 CEP97Q8IW35 865 aa13.63□□□□□ -0.23
NELFCD-209ENST00000486263 GSDMCQ9BYG8 508 aa13.63□□□□□ -0.23
NELFCD-209ENST00000486263 TMEM168Q9H0V1 697 aa13.63□□□□□ -0.23
NELFCD-209ENST00000486263 ERVMER34-1Q9H9K5 563 aa13.63□□□□□ -0.23
NELFCD-209ENST00000486263 TM7SF3Q9NS93 570 aa13.63□□□□□ -0.23
NELFCD-209ENST00000486263 PCMTD2Q9NV79 361 aa13.63□□□□□ -0.23
NELFCD-209ENST00000486263 EURLQ9NYK6 297 aa13.63□□□□□ -0.23
NELFCD-209ENST00000486263 GALPQ9UBC7 116 aa13.63□□□□□ -0.23
NELFCD-209ENST00000486263 TSR3Q9UJK0 312 aaKnown RBP13.63□□□□□ -0.23
NELFCD-209ENST00000486263 SLC6A14Q9UN76 642 aa13.63□□□□□ -0.23
NELFCD-209ENST00000486263 NOVA2Q9UNW9 492 aaKnown RBP13.63□□□□□ -0.23
NELFCD-209ENST00000486263 DOLKQ9UPQ8 538 aa13.63□□□□□ -0.23
NELFCD-209ENST00000486263 KCNK6Q9Y257 313 aa13.63□□□□□ -0.23
NELFCD-209ENST00000486263 SNX11Q9Y5W9 270 aa13.63□□□□□ -0.23
NELFCD-209ENST00000486263 SNX2O60749 519 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 RFPL1O75677 317 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 ZNF806P0C7X5 589 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 CCDC166P0CW27 439 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 CBSLP0DN79 551 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 ENO3P13929 434 aaPredicted RBP13.62□□□□□ -0.23
NELFCD-209ENST00000486263 NME1P15531 152 aaKnown RBP13.62□□□□□ -0.23
NELFCD-209ENST00000486263 KRT4P19013 534 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 IDSP22304 550 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 CBSP35520 551 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 MPLP40238 635 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 CTSKP43235 329 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 ARRB1P49407 418 aaPredicted RBP13.62□□□□□ -0.23
NELFCD-209ENST00000486263 SPEM2Q0P670 501 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 NFE2L1Q14494 772 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 ELOCQ15369 112 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 ZKSCAN8Q15776 578 aaPredicted RBP13.62□□□□□ -0.23
NELFCD-209ENST00000486263 FAM83EQ2M2I3 478 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 KIF19Q2TAC6 998 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 TRIM61Q5EBN2 209 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 PRRT3Q5FWE3 981 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 PLA2G2CQ5R387 149 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 LRRC8EQ6NSJ5 796 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 KLC3Q6P597 504 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 IL27RAQ6UWB1 636 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 TAF8Q7Z7C8 310 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 C11orf96Q7Z7L8 435 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 TRABD2AQ86V40 505 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 CPNE9Q8IYJ1 553 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 KIAA2013Q8IYS2 634 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 MYO1HQ8N1T3 1032 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 CD200R1Q8TD46 325 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 ISL2Q96A47 359 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 LINGO1Q96FE5 620 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 SLC30A3Q99726 388 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 ZDHHC5Q9C0B5 715 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 IQCGQ9H095 443 aaKnown RBP13.62□□□□□ -0.23
NELFCD-209ENST00000486263 COG4Q9H9E3 785 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 PARD6AQ9NPB6 346 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 SEMA4GQ9NTN9 838 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 SPASTQ9UBP0 616 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 SLC23A2Q9UGH3 650 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 ACSL5Q9ULC5 683 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 MED16Q9Y2X0 877 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 PCYT1BQ9Y5K3 369 aaPredicted RBP13.62□□□□□ -0.23
NELFCD-209ENST00000486263 KNL1Q8NG31 2342 aa13.62□□□□□ -0.23
NELFCD-209ENST00000486263 CACNA1AO00555 2505 aa13.61□□□□□ -0.23
NELFCD-209ENST00000486263 PABPN1LA6NDY0 278 aaKnown RBP13.61□□□□□ -0.23
NELFCD-209ENST00000486263 PDZK1P1A8MUH7 402 aa13.61□□□□□ -0.23
NELFCD-209ENST00000486263 FOXO6A8MYZ6 492 aa13.61□□□□□ -0.23
NELFCD-209ENST00000486263 EIF3FO00303 357 aaPredicted RBP13.61□□□□□ -0.23
NELFCD-209ENST00000486263 IFRD1O00458 451 aaPredicted RBP13.61□□□□□ -0.23
NELFCD-209ENST00000486263 COPEO14579 308 aa13.61□□□□□ -0.23
NELFCD-209ENST00000486263 KHNYNO15037 678 aaKnown RBP13.61□□□□□ -0.23
NELFCD-209ENST00000486263 DFNA5O60443 496 aa13.61□□□□□ -0.23
NELFCD-209ENST00000486263 ZNF37AP17032 561 aaPredicted RBP13.61□□□□□ -0.23
NELFCD-209ENST00000486263 ACTR1BP42025 376 aa13.61□□□□□ -0.23
NELFCD-209ENST00000486263 HALP42357 657 aa13.61□□□□□ -0.23
NELFCD-209ENST00000486263 PREPP48147 710 aa13.61□□□□□ -0.23
NELFCD-209ENST00000486263 CCT5P48643 541 aa13.61□□□□□ -0.23
NELFCD-209ENST00000486263 KPNA2P52292 529 aaKnown RBP13.61□□□□□ -0.23
NELFCD-209ENST00000486263 PGGT1BP53609 377 aa13.61□□□□□ -0.23
NELFCD-209ENST00000486263 ATXN3P54252 364 aaPredicted RBP13.61□□□□□ -0.23
NELFCD-209ENST00000486263 ACTR1AP61163 376 aa13.61□□□□□ -0.23
NELFCD-209ENST00000486263 TIAL1Q01085 375 aaKnown RBP eCLIP13.61□□□□□ -0.23
NELFCD-209ENST00000486263 CTBSQ01459 385 aa13.61□□□□□ -0.23
NELFCD-209ENST00000486263 DMPKQ09013 629 aa13.61□□□□□ -0.23
NELFCD-209ENST00000486263 RPA4Q13156 261 aa13.61□□□□□ -0.23
NELFCD-209ENST00000486263 ACSBG2Q5FVE4 666 aa13.61□□□□□ -0.23
NELFCD-209ENST00000486263 PPM1JQ5JR12 505 aa13.61□□□□□ -0.23
NELFCD-209ENST00000486263 PRAMEF14Q5SWL7 426 aa13.61□□□□□ -0.23
NELFCD-209ENST00000486263 AGAP9Q5VTM2 703 aa13.61□□□□□ -0.23
NELFCD-209ENST00000486263 KCTD16Q68DU8 428 aa13.61□□□□□ -0.23
NELFCD-209ENST00000486263 SLC23A3Q6PIS1 610 aa13.61□□□□□ -0.23
NELFCD-209ENST00000486263 SLC30A9Q6PML9 568 aa13.61□□□□□ -0.23
NELFCD-209ENST00000486263 GKN2Q86XP6 184 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms