RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 ZNF768Q9H5H4 540 aaKnown RBP6.86□□□□□ -1.31
VPS50-218ENST00000485994 SYNDIG1Q9H7V2 258 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 CASS4Q9NQ75 786 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 EIF2B3Q9NR50 452 aaKnown RBP6.86□□□□□ -1.31
VPS50-218ENST00000485994 ZDHHC3Q9NYG2 299 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 TMEM9Q9P0T7 183 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 PAK5Q9P286 719 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 PISDQ9UG56 409 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 FKBPLQ9UIM3 349 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 TTC7AQ9ULT0 858 aaPredicted RBP6.86□□□□□ -1.31
VPS50-218ENST00000485994 WDR37Q9Y2I8 494 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 PCDHB11Q9Y5F2 797 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 HEBP2Q9Y5Z4 205 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 SLC30A1Q9Y6M5 507 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 SPTA1P02549 2419 aa6.86□□□□□ -1.31
VPS50-218ENST00000485994 ANKRD12Q6UB98 2062 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 HEATR9A2RTY3 570 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 GOLGA6L3A6NEY3 463 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 OR2AG2A6NM03 316 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 PDZK1P1A8MUH7 402 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 F5H423 210 aaPredicted RBP6.85□□□□□ -1.31
VPS50-218ENST00000485994 STMND1H3BQB6 276 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 RECKO95980 971 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 GAS8O95995 478 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 SLC4A1P02730 911 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 HGFP14210 728 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 AMD1P17707 334 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 ACRV1P26436 265 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 MAP4P27816 1152 aaKnown RBP6.85□□□□□ -1.31
VPS50-218ENST00000485994 NSG1P42857 185 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 GCGRP47871 477 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 NPY2RP49146 381 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 ARSDP51689 593 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 MAPK10P53779 464 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 CACNG1Q06432 222 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 MAP7Q14244 749 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 GPR18Q14330 331 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 NFE2L1Q14494 772 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 SPARCL1Q14515 664 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 IL11RAQ14626 422 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 RPE65Q16518 533 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 MSS51Q4VC12 460 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 CRTC2Q53ET0 693 aaPredicted RBP6.85□□□□□ -1.31
VPS50-218ENST00000485994 FNBP1LQ5T0N5 605 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 CYB5D1Q6P9G0 228 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 FOXR1Q6PIV2 292 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 CRTC3Q6UUV7 619 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 CEACAM20Q6UY09 585 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 PACS1Q6VY07 963 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 CERS6Q6ZMG9 384 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 CCDC81Q6ZN84 652 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 FAM83HQ6ZRV2 1179 aaPredicted RBP6.85□□□□□ -1.31
VPS50-218ENST00000485994 PRSS42Q7Z5A4 293 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 KMT5CQ86Y97 462 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 TRIM48Q8IWZ4 208 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 RASGEF1CQ8N431 466 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 RCBTB1Q8NDN9 531 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 HM13Q8TCT9 377 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 TTC9Q92623 222 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 NKD1Q969G9 470 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 DCUN1D1Q96GG9 259 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 PBKQ96KB5 322 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 CD180Q99467 661 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 TTC1Q99614 292 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 EFHD1Q9BUP0 239 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 TBC1D10AQ9BXI6 508 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 FAM117AQ9C073 453 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 TWSG1Q9GZX9 223 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 KIR3DX1Q9H7L2 352 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 GRPEL1Q9HAV7 217 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 LZTFL1Q9NQ48 299 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 OCIAD1Q9NX40 245 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 SIDT1Q9NXL6 827 aaKnown RBP6.85□□□□□ -1.31
VPS50-218ENST00000485994 SLC39A1Q9NY26 324 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 CRLS1Q9UJA2 301 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 PILRAQ9UKJ1 303 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 DNAJC16Q9Y2G8 782 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 PPP2R2CQ9Y2T4 447 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 JRKLQ9Y4A0 524 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 TMEM184BQ9Y519 407 aaPredicted RBP6.85□□□□□ -1.31
VPS50-218ENST00000485994 B3GALT1Q9Y5Z6 326 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 COLEC10Q9Y6Z7 277 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 KALRNO60229 2985 aa6.85□□□□□ -1.31
VPS50-218ENST00000485994 TLN1Q9Y490 2541 aaKnown RBP6.84□□□□□ -1.31
VPS50-218ENST00000485994 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.84□□□□□ -1.31
VPS50-218ENST00000485994 OR52A4PA6NMU1 304 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 EFCAB7A8K855 629 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 F8W8V4 182 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 LIN7AO14910 233 aaPredicted RBP6.84□□□□□ -1.31
VPS50-218ENST00000485994 IFNB1P01574 187 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 FGGP02679 453 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 ITGB2P05107 769 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 MSL3P1P0C860 447 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 MTHFD1P11586 935 aaKnown RBP6.84□□□□□ -1.31
VPS50-218ENST00000485994 FGF5P12034 268 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 TPH1P17752 444 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 NELFEP18615 380 aaKnown RBP6.84□□□□□ -1.31
VPS50-218ENST00000485994 AKT1P31749 480 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 MC4RP32245 332 aa6.84□□□□□ -1.31
VPS50-218ENST00000485994 FOXN2P32314 431 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms