RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 GAGE2AQ6NT46 116 aa3.51□□□□□ -1.85
VPS41-213ENST00000485955 KLC3Q6P597 504 aa3.51□□□□□ -1.85
VPS41-213ENST00000485955 FASTKD5Q7L8L6 764 aaKnown RBP3.51□□□□□ -1.85
VPS41-213ENST00000485955 L3MBTL4Q8NA19 623 aa3.51□□□□□ -1.85
VPS41-213ENST00000485955 DDHD1Q8NEL9 900 aa3.51□□□□□ -1.85
VPS41-213ENST00000485955 POMGNT1Q8WZA1 660 aa3.51□□□□□ -1.85
VPS41-213ENST00000485955 ZNF653Q96CK0 615 aa3.51□□□□□ -1.85
VPS41-213ENST00000485955 SH2D4AQ9H788 454 aa3.51□□□□□ -1.85
VPS41-213ENST00000485955 ZNF71Q9NQZ8 489 aaPredicted RBP3.51□□□□□ -1.85
VPS41-213ENST00000485955 SMC4Q9NTJ3 1288 aa3.51□□□□□ -1.85
VPS41-213ENST00000485955 OLA1Q9NTK5 396 aaKnown RBP3.51□□□□□ -1.85
VPS41-213ENST00000485955 GAGE2DQ9UEU5 116 aa3.51□□□□□ -1.85
VPS41-213ENST00000485955 FBXL17Q9UF56 701 aa3.51□□□□□ -1.85
VPS41-213ENST00000485955 RASAL2Q9UJF2 1139 aa3.51□□□□□ -1.85
VPS41-213ENST00000485955 PNMA2Q9UL42 364 aa3.51□□□□□ -1.85
VPS41-213ENST00000485955 SESN1Q9Y6P5 492 aa3.51□□□□□ -1.85
VPS41-213ENST00000485955 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 CREB3O43889 395 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 CRLF1O75462 422 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 TPPPO94811 219 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 CSPG5O95196 566 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 CLPTM1O96005 669 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 GH2P01242 217 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 SRPRAP08240 638 aaKnown RBP3.5□□□□□ -1.85
VPS41-213ENST00000485955 PLA2G4BP0C869 781 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 CHMP24386 653 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 ITGA3P26006 1051 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 HOXA13P31271 388 aaPredicted RBP3.5□□□□□ -1.85
VPS41-213ENST00000485955 PSMC4P43686 418 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 NKX2-1P43699 371 aaPredicted RBP3.5□□□□□ -1.85
VPS41-213ENST00000485955 LUMP51884 338 aaPredicted RBP3.5□□□□□ -1.85
VPS41-213ENST00000485955 CDH11P55287 796 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 PRAMEP78395 509 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 SETQ01105 290 aaPredicted RBP3.5□□□□□ -1.85
VPS41-213ENST00000485955 ZFP69Q49AA0 526 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 HSP90AB4PQ58FF6 505 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 ALS2CLQ60I27 953 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 GPALPP1Q8IXQ4 340 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 SCYL3Q8IZE3 742 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 NGEFQ8N5V2 710 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 TBC1D16Q8TBP0 767 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 DAZLQ92904 295 aaKnown RBP3.5□□□□□ -1.85
VPS41-213ENST00000485955 PRAC1Q96KF2 57 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 NCAPGQ9BPX3 1015 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 RTP3Q9BQQ7 232 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 DNAJC18Q9H819 358 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 ECHDC1Q9NTX5 307 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 OGFRQ9NZT2 677 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 NENFQ9UMX5 172 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 PCDHGA5Q9Y5G8 931 aa3.5□□□□□ -1.85
VPS41-213ENST00000485955 A0A087X0M5 115 aa3.49□□□□□ -1.85
VPS41-213ENST00000485955 IGLV9-49A0A0B4J1Y8 123 aa3.49□□□□□ -1.85
VPS41-213ENST00000485955 A0A1B0GX30 115 aa3.49□□□□□ -1.85
VPS41-213ENST00000485955 NDUFS4O43181 175 aa3.49□□□□□ -1.85
VPS41-213ENST00000485955 CLTBP09497 229 aa3.49□□□□□ -1.85
VPS41-213ENST00000485955 PON1P27169 355 aa3.49□□□□□ -1.85
VPS41-213ENST00000485955 CEACAM8P31997 349 aaPredicted RBP3.49□□□□□ -1.85
VPS41-213ENST00000485955 SUOXP51687 545 aa3.49□□□□□ -1.85
VPS41-213ENST00000485955 CDH8P55286 799 aa3.49□□□□□ -1.85
VPS41-213ENST00000485955 MAMLD1Q13495 774 aa3.49□□□□□ -1.85
VPS41-213ENST00000485955 TUBB2AQ13885 445 aa3.49□□□□□ -1.85
VPS41-213ENST00000485955 GCNT6Q5T4J0 391 aa3.49□□□□□ -1.85
VPS41-213ENST00000485955 KRTAP5-1Q6L8H4 278 aa3.49□□□□□ -1.85
VPS41-213ENST00000485955 BHLHB9Q6PI77 547 aa3.49□□□□□ -1.85
VPS41-213ENST00000485955 CHST9Q7L1S5 443 aa3.49□□□□□ -1.85
VPS41-213ENST00000485955 ISCA2Q86U28 154 aa3.49□□□□□ -1.85
VPS41-213ENST00000485955 TICAM1Q8IUC6 712 aa3.49□□□□□ -1.85
VPS41-213ENST00000485955 TMTC2Q8N394 836 aa3.49□□□□□ -1.85
VPS41-213ENST00000485955 TMEM143Q96AN5 459 aa3.49□□□□□ -1.85
VPS41-213ENST00000485955 DACH2Q96NX9 599 aa3.49□□□□□ -1.85
VPS41-213ENST00000485955 TUBB2BQ9BVA1 445 aa3.49□□□□□ -1.85
VPS41-213ENST00000485955 ERVMER34-1Q9H9K5 563 aa3.49□□□□□ -1.85
VPS41-213ENST00000485955 SEPT11Q9NVA2 429 aaKnown RBP3.49□□□□□ -1.85
VPS41-213ENST00000485955 COQ3Q9NZJ6 369 aa3.49□□□□□ -1.85
VPS41-213ENST00000485955 NPAP1Q9NZP6 1156 aa3.49□□□□□ -1.85
VPS41-213ENST00000485955 RABGAP1Q9Y3P9 1069 aa3.49□□□□□ -1.85
VPS41-213ENST00000485955 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.49□□□□□ -1.85
VPS41-213ENST00000485955 SOS1Q07889 1333 aaPredicted RBP3.48□□□□□ -1.85
VPS41-213ENST00000485955 IGKV3D-20A0A0C4DH25 116 aa3.48□□□□□ -1.85
VPS41-213ENST00000485955 A0A1B0GVY2 172 aa3.48□□□□□ -1.85
VPS41-213ENST00000485955 SH2B2O14492 632 aaPredicted RBP3.48□□□□□ -1.85
VPS41-213ENST00000485955 TO15178 435 aa3.48□□□□□ -1.85
VPS41-213ENST00000485955 RSL1D1O76021 490 aaKnown RBP3.48□□□□□ -1.85
VPS41-213ENST00000485955 EML2O95834 649 aa3.48□□□□□ -1.85
VPS41-213ENST00000485955 H1F0P07305 194 aaKnown RBP3.48□□□□□ -1.85
VPS41-213ENST00000485955 KRT5P13647 590 aa3.48□□□□□ -1.85
VPS41-213ENST00000485955 TM4SF1P30408 202 aa3.48□□□□□ -1.85
VPS41-213ENST00000485955 ARL3P36405 182 aa3.48□□□□□ -1.85
VPS41-213ENST00000485955 WNT5AP41221 380 aa3.48□□□□□ -1.85
VPS41-213ENST00000485955 SP3Q02447 781 aa3.48□□□□□ -1.85
VPS41-213ENST00000485955 LPAL2Q16609 132 aa3.48□□□□□ -1.85
VPS41-213ENST00000485955 ADAMTSL4-AS1Q5T5F5 129 aa3.48□□□□□ -1.85
VPS41-213ENST00000485955 CYP4A22Q5TCH4 519 aa3.48□□□□□ -1.85
VPS41-213ENST00000485955 CCDC70Q6NSX1 233 aa3.48□□□□□ -1.85
VPS41-213ENST00000485955 CORO6Q6QEF8 472 aa3.48□□□□□ -1.85
VPS41-213ENST00000485955 TICAM2Q86XR7 235 aa3.48□□□□□ -1.85
VPS41-213ENST00000485955 ARID3BQ8IVW6 561 aaPredicted RBP3.48□□□□□ -1.85
VPS41-213ENST00000485955 DNAJC22Q8N4W6 341 aa3.48□□□□□ -1.85
VPS41-213ENST00000485955 ZNF383Q8NA42 475 aa3.48□□□□□ -1.85
VPS41-213ENST00000485955 ANKRD52Q8NB46 1076 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms