RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 NAPRTQ6XQN6 538 aa23.16■■□□□ 1.3
ABCF3-216ENST00000485921 CYS1Q717R9 158 aa23.16■■□□□ 1.3
ABCF3-216ENST00000485921 GALNT7Q86SF2 657 aa23.16■■□□□ 1.3
ABCF3-216ENST00000485921 SLCO6A1Q86UG4 719 aa23.16■■□□□ 1.3
ABCF3-216ENST00000485921 IFI44Q8TCB0 444 aa23.16■■□□□ 1.3
ABCF3-216ENST00000485921 NAT6Q93015 286 aa23.16■■□□□ 1.3
ABCF3-216ENST00000485921 WWP1Q9H0M0 922 aa23.16■■□□□ 1.3
ABCF3-216ENST00000485921 CCDC68Q9H2F9 335 aa23.16■■□□□ 1.3
ABCF3-216ENST00000485921 LRIT1Q9P2V4 623 aa23.16■■□□□ 1.3
ABCF3-216ENST00000485921 RNF215Q9Y6U7 377 aa23.16■■□□□ 1.3
ABCF3-216ENST00000485921 NIPSNAP2O75323 286 aa23.15■■□□□ 1.3
ABCF3-216ENST00000485921 SPAG6O75602 509 aa23.15■■□□□ 1.3
ABCF3-216ENST00000485921 SLC35G4P0C7Q5 338 aa23.15■■□□□ 1.3
ABCF3-216ENST00000485921 FTH1P19P0C7X4 201 aa23.15■■□□□ 1.3
ABCF3-216ENST00000485921 XRCC1P18887 633 aaPredicted RBP23.15■■□□□ 1.3
ABCF3-216ENST00000485921 PREPP48147 710 aa23.15■■□□□ 1.3
ABCF3-216ENST00000485921 RPA4Q13156 261 aa23.15■■□□□ 1.3
ABCF3-216ENST00000485921 SYTL3Q4VX76 610 aa23.15■■□□□ 1.3
ABCF3-216ENST00000485921 ZNF549Q6P9A3 640 aa23.15■■□□□ 1.3
ABCF3-216ENST00000485921 SLC9B2Q86UD5 537 aa23.15■■□□□ 1.3
ABCF3-216ENST00000485921 CCDC74AQ96AQ1 378 aa23.15■■□□□ 1.3
ABCF3-216ENST00000485921 ANKZF1Q9H8Y5 726 aa23.15■■□□□ 1.3
ABCF3-216ENST00000485921 SMYD2Q9NRG4 433 aa23.15■■□□□ 1.3
ABCF3-216ENST00000485921 NINJ2Q9NZG7 142 aa23.15■■□□□ 1.3
ABCF3-216ENST00000485921 ZNF624Q9P2J8 865 aaPredicted RBP23.15■■□□□ 1.3
ABCF3-216ENST00000485921 CPNE7Q9UBL6 633 aa23.15■■□□□ 1.3
ABCF3-216ENST00000485921 APOBEC2Q9Y235 224 aaKnown RBP23.15■■□□□ 1.3
ABCF3-216ENST00000485921 PCDHGA1Q9Y5H4 931 aa23.15■■□□□ 1.3
ABCF3-216ENST00000485921 SLC5A10A0PJK1 596 aa23.14■■□□□ 1.29
ABCF3-216ENST00000485921 OR52A4PA6NMU1 304 aa23.14■■□□□ 1.29
ABCF3-216ENST00000485921 RHPN2P1A8MT19 583 aa23.14■■□□□ 1.29
ABCF3-216ENST00000485921 NUDT21O43809 227 aaKnown RBP23.14■■□□□ 1.29
ABCF3-216ENST00000485921 RFPL3O75679 317 aa23.14■■□□□ 1.29
ABCF3-216ENST00000485921 CHRM3P20309 590 aa23.14■■□□□ 1.29
ABCF3-216ENST00000485921 AOAHP28039 575 aa23.14■■□□□ 1.29
ABCF3-216ENST00000485921 PDHA2P29803 388 aa23.14■■□□□ 1.29
ABCF3-216ENST00000485921 STX2P32856 288 aa23.14■■□□□ 1.29
ABCF3-216ENST00000485921 CSE1LP55060 971 aaKnown RBP23.14■■□□□ 1.29
ABCF3-216ENST00000485921 PLOD1Q02809 727 aaPredicted RBP23.14■■□□□ 1.29
ABCF3-216ENST00000485921 ILKQ13418 452 aa23.14■■□□□ 1.29
ABCF3-216ENST00000485921 RPE65Q16518 533 aa23.14■■□□□ 1.29
ABCF3-216ENST00000485921 PERM1Q5SV97 790 aa23.14■■□□□ 1.29
ABCF3-216ENST00000485921 EIF1ADQ8N9N8 165 aaKnown RBP23.14■■□□□ 1.29
ABCF3-216ENST00000485921 SPDYE1Q8NFV5 336 aaPredicted RBP23.14■■□□□ 1.29
ABCF3-216ENST00000485921 FBF1Q8TES7 1133 aa23.14■■□□□ 1.29
ABCF3-216ENST00000485921 CDKL2Q92772 493 aa23.14■■□□□ 1.29
ABCF3-216ENST00000485921 TMEM159Q96B96 161 aa23.14■■□□□ 1.29
ABCF3-216ENST00000485921 INSM2Q96T92 566 aaPredicted RBP23.14■■□□□ 1.29
ABCF3-216ENST00000485921 SARS2Q9NP81 518 aaKnown RBP23.14■■□□□ 1.29
ABCF3-216ENST00000485921 NSMCE4AQ9NXX6 385 aa23.14■■□□□ 1.29
ABCF3-216ENST00000485921 COMMD10Q9Y6G5 202 aa23.14■■□□□ 1.29
ABCF3-216ENST00000485921 FAM159BA6NKW6 160 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 CXorf49A8MYA2 514 aaPredicted RBP23.13■■□□□ 1.29
ABCF3-216ENST00000485921 E5RI56 91 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 KPNA5O15131 536 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 PPM1DO15297 605 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 PIAS1O75925 651 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 APOA4P06727 396 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 GP1BAP07359 652 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 SLC19A1P41440 591 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 FASLGP48023 281 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 CD151P48509 253 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 UBE2IP63279 158 aaKnown RBP23.13■■□□□ 1.29
ABCF3-216ENST00000485921 HHEXQ03014 270 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 HSPA14Q0VDF9 509 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 SLMAPQ14BN4 828 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 TMED2Q15363 201 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 CAPRIN2Q6IMN6 1127 aaKnown RBP23.13■■□□□ 1.29
ABCF3-216ENST00000485921 DGLUCYQ7Z3D6 616 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 STRA8Q7Z7C7 330 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 SLC26A11Q86WA9 606 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 TRIM48Q8IWZ4 208 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 AVL9Q8NBF6 648 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 ASZ1Q8WWH4 475 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 UBXN4Q92575 508 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 FAM136AQ96C01 138 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 CXorf40BQ96DE9 158 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 RMDN2Q96LZ7 410 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 AARSD1Q9BTE6 412 aaKnown RBP23.13■■□□□ 1.29
ABCF3-216ENST00000485921 OR52A5Q9H2C5 316 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 CDC42EP4Q9H3Q1 356 aaKnown RBP23.13■■□□□ 1.29
ABCF3-216ENST00000485921 STN1Q9H668 368 aaKnown RBP23.13■■□□□ 1.29
ABCF3-216ENST00000485921 PSAT1Q9Y617 370 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 SPTBN4Q9H254 2564 aa23.13■■□□□ 1.29
ABCF3-216ENST00000485921 VIPP01282 170 aa23.12■■□□□ 1.29
ABCF3-216ENST00000485921 C1QAP02745 245 aa23.12■■□□□ 1.29
ABCF3-216ENST00000485921 FAM153BP0C7A2 387 aa23.12■■□□□ 1.29
ABCF3-216ENST00000485921 PNLIPP16233 465 aa23.12■■□□□ 1.29
ABCF3-216ENST00000485921 TNFRSF8P28908 595 aa23.12■■□□□ 1.29
ABCF3-216ENST00000485921 ABCG1P45844 678 aa23.12■■□□□ 1.29
ABCF3-216ENST00000485921 FAM153CQ494X1 144 aa23.12■■□□□ 1.29
ABCF3-216ENST00000485921 CHCHD2P9Q5T1J5 151 aaPredicted RBP23.12■■□□□ 1.29
ABCF3-216ENST00000485921 OTOAQ7RTW8 1153 aa23.12■■□□□ 1.29
ABCF3-216ENST00000485921 GSPT2Q8IYD1 628 aaKnown RBP23.12■■□□□ 1.29
ABCF3-216ENST00000485921 C12orf66Q96MD2 445 aa23.12■■□□□ 1.29
ABCF3-216ENST00000485921 NDNQ99608 321 aa23.12■■□□□ 1.29
ABCF3-216ENST00000485921 CCDC3Q9BQI4 270 aa23.12■■□□□ 1.29
ABCF3-216ENST00000485921 IMP3Q9NV31 184 aaKnown RBP23.12■■□□□ 1.29
ABCF3-216ENST00000485921 GALPQ9UBC7 116 aa23.12■■□□□ 1.29
ABCF3-216ENST00000485921 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms