RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ZBTB43O43298 467 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 ZIC3O60481 467 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 DDNO94850 711 aaPredicted RBP4.4□□□□□ -1.71
VPS13A-211ENST00000484581 SOX30O94993 753 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 VNN2O95498 520 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 FAM86B2P0C5J1 330 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 GNAZP19086 355 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 CYP11B2P19099 503 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 KCNA5P22460 613 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 TNFRSF8P28908 595 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 BDKRB2P30411 391 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 SOAT1P35610 550 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 KHKP50053 298 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 ASCL1P50553 236 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 SNU13P55769 128 aaKnown RBP4.4□□□□□ -1.71
VPS13A-211ENST00000484581 ZP1P60852 638 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 ARF5P84085 180 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 PRKCZQ05513 592 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 UBE2V1Q13404 147 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 CTTNQ14247 550 aaKnown RBP4.4□□□□□ -1.71
VPS13A-211ENST00000484581 FUT11Q495W5 492 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 CEP78Q5JTW2 689 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 DCAF12L2Q5VW00 463 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 ALS2CLQ60I27 953 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 PRR27Q6MZM9 219 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 SLC36A4Q6YBV0 504 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 OR7G3Q8NG95 312 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 THAP6Q8TBB0 222 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 APOLD1Q96LR9 279 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 LRFN5Q96NI6 719 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 ZNF350Q9GZX5 532 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 THAP9Q9H5L6 903 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 CATSPERBQ9H7T0 1116 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 TMEM206Q9H813 350 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 TBC1D17Q9HA65 648 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 MCM9Q9NXL9 1143 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 POLLQ9UGP5 575 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 TINAGQ9UJW2 476 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 TAF1P21675 1872 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 ZNF521Q96K83 1311 aa4.4□□□□□ -1.71
VPS13A-211ENST00000484581 CKAP5Q14008 2032 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 SMIM35A0A1B0GVV1 85 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 GOLGA6L9A6NEM1 432 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 TMEM221A6NGB7 291 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 YDJCA8MPS7 323 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 E5RJQ4 531 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 ANKRD28O15084 1053 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 MOCS3O95396 460 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 OR2T7P0C7T2 308 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 P4HA1P13674 534 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 ARSBP15848 533 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 ACAT1P24752 427 aaKnown RBP4.39□□□□□ -1.71
VPS13A-211ENST00000484581 TIA1P31483 386 aaKnown RBP eCLIP4.39□□□□□ -1.71
VPS13A-211ENST00000484581 STX2P32856 288 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 RPL3P39023 403 aaKnown RBP4.39□□□□□ -1.71
VPS13A-211ENST00000484581 RGS19P49795 217 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 CTSCP53634 463 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 TEFQ10587 303 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 CBX3Q13185 183 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 MTX1Q13505 466 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 DAZAP2Q15038 168 aaPredicted RBP4.39□□□□□ -1.71
VPS13A-211ENST00000484581 ETFDHQ16134 617 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 KBTBD12Q3ZCT8 623 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 SLC39A12Q504Y0 691 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 C18orf63Q68DL7 685 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 TRAPPC11Q7Z392 1133 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 ATG9AQ7Z3C6 839 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 ZC3HC1Q86WB0 502 aaKnown RBP4.39□□□□□ -1.71
VPS13A-211ENST00000484581 OR2AJ1Q8NGZ0 328 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 PSMA8Q8TAA3 256 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.39□□□□□ -1.71
VPS13A-211ENST00000484581 DENND1AQ8TEH3 1009 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 SEPT1Q8WYJ6 367 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 MOB3AQ96BX8 217 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 OTUB1Q96FW1 271 aaPredicted RBP4.39□□□□□ -1.71
VPS13A-211ENST00000484581 PRMT6Q96LA8 375 aaPredicted RBP4.39□□□□□ -1.71
VPS13A-211ENST00000484581 FEVQ99581 238 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 CPNE1Q99829 537 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 KXD1Q9BQD3 176 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 C16orf70Q9BSU1 422 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 CACNG6Q9BXT2 260 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 DPAGT1Q9H3H5 408 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 FN3KQ9H479 309 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 LMAN1LQ9HAT1 526 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 FZD3Q9NPG1 666 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 KRCC1Q9NPI7 259 aaPredicted RBP4.39□□□□□ -1.71
VPS13A-211ENST00000484581 IARS2Q9NSE4 1012 aaKnown RBP4.39□□□□□ -1.71
VPS13A-211ENST00000484581 DNAJC17Q9NVM6 304 aaKnown RBP4.39□□□□□ -1.71
VPS13A-211ENST00000484581 VPS18Q9P253 973 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 EPS15L1Q9UBC2 864 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 IL36RNQ9UBH0 155 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 FBXL2Q9UKC9 423 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 PADI3Q9ULW8 664 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 COG5Q9UP83 839 aa4.39□□□□□ -1.71
VPS13A-211ENST00000484581 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.39□□□□□ -1.71
VPS13A-211ENST00000484581 KCNU1A8MYU2 1149 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 PLK4O00444 970 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 XRCC3O43542 346 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 ITM2AO43736 263 aa4.38□□□□□ -1.71
VPS13A-211ENST00000484581 OR10H2O60403 315 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms