RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 SPTBP11277 2137 aa12□□□□□ -0.49
MSH5-216ENST00000484309 ADRA1DP25100 572 aa12□□□□□ -0.49
MSH5-216ENST00000484309 ARCN1P48444 511 aaKnown RBP12□□□□□ -0.49
MSH5-216ENST00000484309 SEMA3AQ14563 771 aa12□□□□□ -0.49
MSH5-216ENST00000484309 BRD3Q15059 726 aa12□□□□□ -0.49
MSH5-216ENST00000484309 AFTPHQ6ULP2 937 aa12□□□□□ -0.49
MSH5-216ENST00000484309 NAPRTQ6XQN6 538 aa12□□□□□ -0.49
MSH5-216ENST00000484309 GPR155Q7Z3F1 870 aa12□□□□□ -0.49
MSH5-216ENST00000484309 LDB1Q86U70 411 aaPredicted RBP12□□□□□ -0.49
MSH5-216ENST00000484309 RBM12BQ8IXT5 1001 aaKnown RBP12□□□□□ -0.49
MSH5-216ENST00000484309 RASGEF1CQ8N431 466 aa12□□□□□ -0.49
MSH5-216ENST00000484309 BMPERQ8N8U9 685 aa12□□□□□ -0.49
MSH5-216ENST00000484309 COG1Q8WTW3 980 aa12□□□□□ -0.49
MSH5-216ENST00000484309 HEXDCQ8WVB3 486 aa12□□□□□ -0.49
MSH5-216ENST00000484309 PBKQ96KB5 322 aa12□□□□□ -0.49
MSH5-216ENST00000484309 LINC00615Q96LM1 132 aaPredicted RBP12□□□□□ -0.49
MSH5-216ENST00000484309 C9orf72Q96LT7 481 aa12□□□□□ -0.49
MSH5-216ENST00000484309 BBC3Q96PG8 261 aaPredicted RBP12□□□□□ -0.49
MSH5-216ENST00000484309 RANBP9Q96S59 729 aa12□□□□□ -0.49
MSH5-216ENST00000484309 NRTNQ99748 197 aa12□□□□□ -0.49
MSH5-216ENST00000484309 CCM2Q9BSQ5 444 aa12□□□□□ -0.49
MSH5-216ENST00000484309 EIF2B3Q9NR50 452 aaKnown RBP12□□□□□ -0.49
MSH5-216ENST00000484309 CHRAC1Q9NRG0 131 aa12□□□□□ -0.49
MSH5-216ENST00000484309 ACSL5Q9ULC5 683 aa12□□□□□ -0.49
MSH5-216ENST00000484309 B4E171 279 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 ZNF185O15231 689 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 KRT14P02533 472 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 ITGB6P18564 788 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 PSMA3P25788 255 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 MGAT1P26572 445 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 NMBRP28336 390 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 PDHA2P29803 388 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 TSPAN7P41732 249 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 CSE1LP55060 971 aaKnown RBP11.99□□□□□ -0.49
MSH5-216ENST00000484309 UCNP55089 124 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 SH3BP2P78314 561 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 PRAMEP78395 509 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 FOXM1Q08050 763 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 GPS1Q13098 491 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 KRT33BQ14525 404 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 CACHD1Q5VU97 1274 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 KIAA1614Q5VZ46 1190 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 CES3Q6UWW8 571 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 CCDC81Q6ZN84 652 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 ZNF534Q76KX8 674 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.99□□□□□ -0.49
MSH5-216ENST00000484309 MAGOHBQ96A72 148 aaKnown RBP11.99□□□□□ -0.49
MSH5-216ENST00000484309 CCNL2Q96S94 520 aaPredicted RBP11.99□□□□□ -0.49
MSH5-216ENST00000484309 OSBPL9Q96SU4 736 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 HOMER3Q9NSC5 361 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 SYBUQ9NX95 663 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 SLC24A2Q9UI40 661 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 ACSL6Q9UKU0 697 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 MGAQ8IWI9 3026 aa11.99□□□□□ -0.49
MSH5-216ENST00000484309 ATRXP46100 2492 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 PGRMC1O00264 195 aaKnown RBP11.98□□□□□ -0.49
MSH5-216ENST00000484309 KIF5CO60282 957 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 ANKRD34CP0C6C1 535 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 TPSB2P20231 275 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 COILP38432 576 aaPredicted RBP11.98□□□□□ -0.49
MSH5-216ENST00000484309 NSG1P42857 185 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 MC2RQ01718 297 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 ACVR1Q04771 509 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 VAC14Q08AM6 782 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 LAMB3Q13751 1172 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 BOP1Q14137 746 aaKnown RBP11.98□□□□□ -0.49
MSH5-216ENST00000484309 ITIH4Q14624 930 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 TPSAB1Q15661 275 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 ZNF658BQ4V348 819 aaPredicted RBP11.98□□□□□ -0.49
MSH5-216ENST00000484309 SOWAHCQ53LP3 525 aaPredicted RBP11.98□□□□□ -0.49
MSH5-216ENST00000484309 FASTKD1Q53R41 847 aaKnown RBP11.98□□□□□ -0.49
MSH5-216ENST00000484309 PCID2Q5JVF3 399 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 MANEAQ5SRI9 462 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 DCAF12Q5T6F0 453 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 ANKRD22Q5VYY1 191 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 CAPRIN2Q6IMN6 1127 aaKnown RBP11.98□□□□□ -0.49
MSH5-216ENST00000484309 CCDC137Q6PK04 289 aaKnown RBP11.98□□□□□ -0.49
MSH5-216ENST00000484309 C4orf22Q6V702 233 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 PHC3Q8NDX5 983 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 OR4L1Q8NH43 312 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 ELMO1Q92556 727 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 ANP32BQ92688 251 aaKnown RBP11.98□□□□□ -0.49
MSH5-216ENST00000484309 ELMO2Q96JJ3 720 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 FERD3LQ96RJ6 166 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 DDA1Q9BW61 102 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 OR52A5Q9H2C5 316 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 VPS37BQ9H9H4 285 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 SIDT1Q9NXL6 827 aaKnown RBP11.98□□□□□ -0.49
MSH5-216ENST00000484309 MARCH4Q9P2E8 410 aaPredicted RBP11.98□□□□□ -0.49
MSH5-216ENST00000484309 PCDHB11Q9Y5F2 797 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 PCDHGA3Q9Y5H0 932 aa11.98□□□□□ -0.49
MSH5-216ENST00000484309 TEX51A0A1B0GUA7 166 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 C17orf113A0A1B0GUU1 675 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 KLHL33A6NCF5 533 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 OR6C74A6NCV1 312 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 OR5K3A6NET4 321 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 STMND1H3BQB6 276 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 EFSO43281 561 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 AVILO75366 819 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 TMEM63AO94886 807 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms