RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 ZFP36L1Q07352 338 aaKnown RBP26.08■■□□□ 1.77
SMDT1-203ENST00000484235 C2orf54Q08AI8 447 aa26.08■■□□□ 1.77
SMDT1-203ENST00000484235 MAP9Q49MG5 647 aa26.08■■□□□ 1.77
SMDT1-203ENST00000484235 CAPRIN2Q6IMN6 1127 aaKnown RBP26.08■■□□□ 1.77
SMDT1-203ENST00000484235 NEPROQ6NW34 567 aa26.08■■□□□ 1.77
SMDT1-203ENST00000484235 B3GNT8Q7Z7M8 397 aa26.08■■□□□ 1.77
SMDT1-203ENST00000484235 PDIK1LQ8N165 341 aa26.08■■□□□ 1.77
SMDT1-203ENST00000484235 LILRA3Q8N6C8 439 aaPredicted RBP26.08■■□□□ 1.77
SMDT1-203ENST00000484235 OTUD6BQ8N6M0 293 aa26.08■■□□□ 1.77
SMDT1-203ENST00000484235 ZNF592Q92610 1267 aa26.08■■□□□ 1.77
SMDT1-203ENST00000484235 ZNF669Q96BR6 464 aaPredicted RBP26.08■■□□□ 1.77
SMDT1-203ENST00000484235 NXPE2Q96DL1 559 aa26.08■■□□□ 1.77
SMDT1-203ENST00000484235 INSM2Q96T92 566 aaPredicted RBP26.08■■□□□ 1.77
SMDT1-203ENST00000484235 ERP44Q9BS26 406 aa26.08■■□□□ 1.77
SMDT1-203ENST00000484235 FOXP3Q9BZS1 431 aa26.08■■□□□ 1.77
SMDT1-203ENST00000484235 STRADBQ9C0K7 418 aa26.08■■□□□ 1.77
SMDT1-203ENST00000484235 EPB41L1Q9H4G0 881 aa26.08■■□□□ 1.77
SMDT1-203ENST00000484235 LAMA5O15230 3695 aa26.08■■□□□ 1.77
SMDT1-203ENST00000484235 ZCWPW2A0A1B0GU75 182 aa26.07■■□□□ 1.76
SMDT1-203ENST00000484235 GOLGA8KD6RF30 607 aa26.07■■□□□ 1.76
SMDT1-203ENST00000484235 GOLGA8TH3BQL2 631 aa26.07■■□□□ 1.76
SMDT1-203ENST00000484235 PRMT5O14744 637 aaPredicted RBP26.07■■□□□ 1.76
SMDT1-203ENST00000484235 PFDN6O15212 129 aa26.07■■□□□ 1.76
SMDT1-203ENST00000484235 CCKBRP32239 447 aa26.07■■□□□ 1.76
SMDT1-203ENST00000484235 ITGA8P53708 1063 aa26.07■■□□□ 1.76
SMDT1-203ENST00000484235 TMPRSS9Q7Z410 1059 aa26.07■■□□□ 1.76
SMDT1-203ENST00000484235 LRRC6Q86X45 466 aa26.07■■□□□ 1.76
SMDT1-203ENST00000484235 BBOF1Q8ND07 529 aa26.07■■□□□ 1.76
SMDT1-203ENST00000484235 NUDT22Q9BRQ3 303 aa26.07■■□□□ 1.76
SMDT1-203ENST00000484235 NAT9Q9BTE0 207 aa26.07■■□□□ 1.76
SMDT1-203ENST00000484235 SNX24Q9Y343 169 aa26.07■■□□□ 1.76
SMDT1-203ENST00000484235 ACACAQ13085 2346 aa26.06■■□□□ 1.76
SMDT1-203ENST00000484235 LIN7AO14910 233 aaPredicted RBP26.06■■□□□ 1.76
SMDT1-203ENST00000484235 RAD51CO43502 376 aa26.06■■□□□ 1.76
SMDT1-203ENST00000484235 DUX1O43812 170 aa26.06■■□□□ 1.76
SMDT1-203ENST00000484235 MTHFD1P11586 935 aaKnown RBP26.06■■□□□ 1.76
SMDT1-203ENST00000484235 RPL21P46778 160 aaKnown RBP26.06■■□□□ 1.76
SMDT1-203ENST00000484235 MRPS25P82663 173 aaKnown RBP26.06■■□□□ 1.76
SMDT1-203ENST00000484235 DHX9Q08211 1270 aaKnown RBP26.06■■□□□ 1.76
SMDT1-203ENST00000484235 WHAMMP3Q1A5X7 153 aa26.06■■□□□ 1.76
SMDT1-203ENST00000484235 MSS51Q4VC12 460 aa26.06■■□□□ 1.76
SMDT1-203ENST00000484235 RNF187Q5TA31 235 aaPredicted RBP26.06■■□□□ 1.76
SMDT1-203ENST00000484235 WDR74Q6RFH5 385 aaPredicted RBP26.06■■□□□ 1.76
SMDT1-203ENST00000484235 ZNF574Q6ZN55 896 aaPredicted RBP26.06■■□□□ 1.76
SMDT1-203ENST00000484235 SLITRK4Q8IW52 837 aa26.06■■□□□ 1.76
SMDT1-203ENST00000484235 SPDYE1Q8NFV5 336 aaPredicted RBP26.06■■□□□ 1.76
SMDT1-203ENST00000484235 OR4D9Q8NGE8 314 aa26.06■■□□□ 1.76
SMDT1-203ENST00000484235 ZFPM2Q8WW38 1151 aa26.06■■□□□ 1.76
SMDT1-203ENST00000484235 ELMO1Q92556 727 aa26.06■■□□□ 1.76
SMDT1-203ENST00000484235 LIN37Q96GY3 246 aaPredicted RBP26.06■■□□□ 1.76
SMDT1-203ENST00000484235 C12orf66Q96MD2 445 aa26.06■■□□□ 1.76
SMDT1-203ENST00000484235 EBNA1BP2Q99848 306 aaKnown RBP26.06■■□□□ 1.76
SMDT1-203ENST00000484235 CARD6Q9BX69 1037 aa26.06■■□□□ 1.76
SMDT1-203ENST00000484235 TSSK1BQ9BXA7 367 aa26.06■■□□□ 1.76
SMDT1-203ENST00000484235 TBC1D10AQ9BXI6 508 aa26.06■■□□□ 1.76
SMDT1-203ENST00000484235 OR52A5Q9H2C5 316 aa26.06■■□□□ 1.76
SMDT1-203ENST00000484235 EPB41L5Q9HCM4 733 aa26.06■■□□□ 1.76
SMDT1-203ENST00000484235 IMP3Q9NV31 184 aaKnown RBP26.06■■□□□ 1.76
SMDT1-203ENST00000484235 AK5Q9Y6K8 562 aa26.06■■□□□ 1.76
SMDT1-203ENST00000484235 FAM169AQ9Y6X4 670 aa26.06■■□□□ 1.76
SMDT1-203ENST00000484235 PRAMEF33A0A0G2JMD5 474 aa26.05■■□□□ 1.76
SMDT1-203ENST00000484235 TP73O15350 636 aa26.05■■□□□ 1.76
SMDT1-203ENST00000484235 TTC4O95801 387 aa26.05■■□□□ 1.76
SMDT1-203ENST00000484235 PGAM1P18669 254 aa26.05■■□□□ 1.76
SMDT1-203ENST00000484235 OGNP20774 298 aaKnown RBP26.05■■□□□ 1.76
SMDT1-203ENST00000484235 LSSP48449 732 aa26.05■■□□□ 1.76
SMDT1-203ENST00000484235 CD151P48509 253 aa26.05■■□□□ 1.76
SMDT1-203ENST00000484235 PPM1FP49593 454 aaPredicted RBP26.05■■□□□ 1.76
SMDT1-203ENST00000484235 PLOD1Q02809 727 aaPredicted RBP26.05■■□□□ 1.76
SMDT1-203ENST00000484235 CFHR1Q03591 330 aa26.05■■□□□ 1.76
SMDT1-203ENST00000484235 THOC5Q13769 683 aaKnown RBP26.05■■□□□ 1.76
SMDT1-203ENST00000484235 GPR18Q14330 331 aa26.05■■□□□ 1.76
SMDT1-203ENST00000484235 LONRF1Q17RB8 773 aa26.05■■□□□ 1.76
SMDT1-203ENST00000484235 TYSND1Q2T9J0 566 aa26.05■■□□□ 1.76
SMDT1-203ENST00000484235 TMEM71Q6P5X7 295 aa26.05■■□□□ 1.76
SMDT1-203ENST00000484235 RMDN2Q96LZ7 410 aa26.05■■□□□ 1.76
SMDT1-203ENST00000484235 P2RY12Q9H244 342 aa26.05■■□□□ 1.76
SMDT1-203ENST00000484235 SEMA6CQ9H3T2 930 aa26.05■■□□□ 1.76
SMDT1-203ENST00000484235 CCDC86Q9H6F5 360 aaKnown RBP26.05■■□□□ 1.76
SMDT1-203ENST00000484235 DKK4Q9UBT3 224 aa26.05■■□□□ 1.76
SMDT1-203ENST00000484235 HEBP2Q9Y5Z4 205 aa26.05■■□□□ 1.76
SMDT1-203ENST00000484235 COLEC10Q9Y6Z7 277 aa26.05■■□□□ 1.76
SMDT1-203ENST00000484235 RPS3P23396 243 aaKnown RBP eCLIP26.04■■□□□ 1.76
SMDT1-203ENST00000484235 CYP4F3Q08477 520 aa26.04■■□□□ 1.76
SMDT1-203ENST00000484235 TUBB2AQ13885 445 aa26.04■■□□□ 1.76
SMDT1-203ENST00000484235 HIF1AQ16665 826 aa26.04■■□□□ 1.76
SMDT1-203ENST00000484235 BBS9Q3SYG4 887 aa26.04■■□□□ 1.76
SMDT1-203ENST00000484235 CILP2Q8IUL8 1156 aa26.04■■□□□ 1.76
SMDT1-203ENST00000484235 WDR36Q8NI36 951 aaKnown RBP26.04■■□□□ 1.76
SMDT1-203ENST00000484235 NCSTNQ92542 709 aa26.04■■□□□ 1.76
SMDT1-203ENST00000484235 TUBB2BQ9BVA1 445 aa26.04■■□□□ 1.76
SMDT1-203ENST00000484235 POLR1BQ9H9Y6 1135 aa26.04■■□□□ 1.76
SMDT1-203ENST00000484235 C20orf96Q9NUD7 363 aaPredicted RBP26.04■■□□□ 1.76
SMDT1-203ENST00000484235 WHRNQ9P202 907 aa26.04■■□□□ 1.76
SMDT1-203ENST00000484235 VPS9D1Q9Y2B5 631 aa26.04■■□□□ 1.76
SMDT1-203ENST00000484235 CFAP20Q9Y6A4 193 aaKnown RBP26.04■■□□□ 1.76
SMDT1-203ENST00000484235 UNC13CQ8NB66 2214 aa26.03■■□□□ 1.76
SMDT1-203ENST00000484235 COL27A1Q8IZC6 1860 aaPredicted RBP26.03■■□□□ 1.76
SMDT1-203ENST00000484235 CCDC187A0A096LP49 1063 aa26.03■■□□□ 1.76
SMDT1-203ENST00000484235 IGHV5-10-1A0A0J9YXX1 117 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms