RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 IFRD1O00458 451 aaPredicted RBP17.98■□□□□ 0.47
SMIM4-204ENST00000482728 PFDN6O15212 129 aa17.98■□□□□ 0.47
SMIM4-204ENST00000482728 FANCGO15287 622 aa17.98■□□□□ 0.47
SMIM4-204ENST00000482728 NDUFS3O75489 264 aa17.98■□□□□ 0.47
SMIM4-204ENST00000482728 DXOO77932 396 aaKnown RBP17.98■□□□□ 0.47
SMIM4-204ENST00000482728 TYRP1P17643 537 aa17.98■□□□□ 0.47
SMIM4-204ENST00000482728 CSF2RBP32927 897 aa17.98■□□□□ 0.47
SMIM4-204ENST00000482728 CSTF2P33240 577 aaKnown RBP eCLIP17.98■□□□□ 0.47
SMIM4-204ENST00000482728 MLLT3P42568 568 aaPredicted RBP17.98■□□□□ 0.47
SMIM4-204ENST00000482728 ERVPABLB-1P60509 514 aa17.98■□□□□ 0.47
SMIM4-204ENST00000482728 CFHR1Q03591 330 aa17.98■□□□□ 0.47
SMIM4-204ENST00000482728 RPA4Q13156 261 aa17.98■□□□□ 0.47
SMIM4-204ENST00000482728 GPR18Q14330 331 aa17.98■□□□□ 0.47
SMIM4-204ENST00000482728 TBC1D25Q3MII6 688 aa17.98■□□□□ 0.47
SMIM4-204ENST00000482728 SNAP47Q5SQN1 464 aa17.98■□□□□ 0.47
SMIM4-204ENST00000482728 RNASEH2BQ5TBB1 312 aaKnown RBP17.98■□□□□ 0.47
SMIM4-204ENST00000482728 MRNIPQ6NTE8 343 aa17.98■□□□□ 0.47
SMIM4-204ENST00000482728 LDB1Q86U70 411 aaPredicted RBP17.98■□□□□ 0.47
SMIM4-204ENST00000482728 MPP5Q8N3R9 675 aa17.98■□□□□ 0.47
SMIM4-204ENST00000482728 LILRA3Q8N6C8 439 aaPredicted RBP17.98■□□□□ 0.47
SMIM4-204ENST00000482728 SPDYE1Q8NFV5 336 aaPredicted RBP17.98■□□□□ 0.47
SMIM4-204ENST00000482728 ELMO1Q92556 727 aa17.98■□□□□ 0.47
SMIM4-204ENST00000482728 TSSK1BQ9BXA7 367 aa17.98■□□□□ 0.47
SMIM4-204ENST00000482728 MARCH4Q9P2E8 410 aaPredicted RBP17.98■□□□□ 0.47
SMIM4-204ENST00000482728 LOXL2Q9Y4K0 774 aa17.98■□□□□ 0.47
SMIM4-204ENST00000482728 HEBP2Q9Y5Z4 205 aa17.98■□□□□ 0.47
SMIM4-204ENST00000482728 COL27A1Q8IZC6 1860 aaPredicted RBP17.97■□□□□ 0.47
SMIM4-204ENST00000482728 BPTFQ12830 3046 aa17.97■□□□□ 0.47
SMIM4-204ENST00000482728 FAM237BA0A1B0GVD1 139 aa17.97■□□□□ 0.47
SMIM4-204ENST00000482728 DNALI1O14645 258 aaPredicted RBP17.97■□□□□ 0.47
SMIM4-204ENST00000482728 LIN7AO14910 233 aaPredicted RBP17.97■□□□□ 0.47
SMIM4-204ENST00000482728 HGSO14964 777 aaPredicted RBP17.97■□□□□ 0.47
SMIM4-204ENST00000482728 SEMA3AQ14563 771 aa17.97■□□□□ 0.47
SMIM4-204ENST00000482728 PLCL1Q15111 1095 aa17.97■□□□□ 0.47
SMIM4-204ENST00000482728 IZUMO3Q5VZ72 239 aa17.97■□□□□ 0.47
SMIM4-204ENST00000482728 CAPRIN2Q6IMN6 1127 aaKnown RBP17.97■□□□□ 0.47
SMIM4-204ENST00000482728 KLHL35Q6PF15 583 aa17.97■□□□□ 0.47
SMIM4-204ENST00000482728 IGF2-ASQ6U949 168 aa17.97■□□□□ 0.47
SMIM4-204ENST00000482728 JAMLQ86YT9 394 aa17.97■□□□□ 0.47
SMIM4-204ENST00000482728 AGBL5Q8NDL9 886 aa17.97■□□□□ 0.47
SMIM4-204ENST00000482728 RCBTB1Q8NDN9 531 aa17.97■□□□□ 0.47
SMIM4-204ENST00000482728 ZFPM2Q8WW38 1151 aa17.97■□□□□ 0.47
SMIM4-204ENST00000482728 KRT12Q99456 494 aa17.97■□□□□ 0.47
SMIM4-204ENST00000482728 TMEM9Q9P0T7 183 aa17.97■□□□□ 0.47
SMIM4-204ENST00000482728 PISDQ9UG56 409 aa17.97■□□□□ 0.47
SMIM4-204ENST00000482728 RPS6KL1Q9Y6S9 549 aa17.97■□□□□ 0.47
SMIM4-204ENST00000482728 PMS2P1A4D2B8 440 aa17.96■□□□□ 0.47
SMIM4-204ENST00000482728 A8MU76 341 aa17.96■□□□□ 0.47
SMIM4-204ENST00000482728 PRMT5O14744 637 aaPredicted RBP17.96■□□□□ 0.47
SMIM4-204ENST00000482728 TTI1O43156 1089 aa17.96■□□□□ 0.47
SMIM4-204ENST00000482728 RRP8O43159 456 aaKnown RBP17.96■□□□□ 0.47
SMIM4-204ENST00000482728 ITGA2BP08514 1039 aa17.96■□□□□ 0.47
SMIM4-204ENST00000482728 HGFP14210 728 aa17.96■□□□□ 0.47
SMIM4-204ENST00000482728 NDUFS1P28331 727 aa17.96■□□□□ 0.47
SMIM4-204ENST00000482728 PREPP48147 710 aa17.96■□□□□ 0.47
SMIM4-204ENST00000482728 CD151P48509 253 aa17.96■□□□□ 0.47
SMIM4-204ENST00000482728 PLOD1Q02809 727 aaPredicted RBP17.96■□□□□ 0.47
SMIM4-204ENST00000482728 DHX34Q14147 1143 aaKnown RBP17.96■□□□□ 0.47
SMIM4-204ENST00000482728 C16orf72Q14CZ0 275 aa17.96■□□□□ 0.47
SMIM4-204ENST00000482728 BRD3Q15059 726 aa17.96■□□□□ 0.47
SMIM4-204ENST00000482728 ANKRD20A4Q4UJ75 823 aa17.96■□□□□ 0.47
SMIM4-204ENST00000482728 SYTL3Q4VX76 610 aa17.96■□□□□ 0.47
SMIM4-204ENST00000482728 PTRHD1Q6GMV3 140 aaKnown RBP17.96■□□□□ 0.47
SMIM4-204ENST00000482728 KIAA0930Q6ICG6 404 aaPredicted RBP17.96■□□□□ 0.47
SMIM4-204ENST00000482728 HOOK3Q86VS8 718 aa17.96■□□□□ 0.47
SMIM4-204ENST00000482728 GPR150Q8NGU9 434 aa17.96■□□□□ 0.47
SMIM4-204ENST00000482728 ZNF669Q96BR6 464 aaPredicted RBP17.96■□□□□ 0.47
SMIM4-204ENST00000482728 PRR11Q96HE9 360 aaPredicted RBP17.96■□□□□ 0.47
SMIM4-204ENST00000482728 RMDN2Q96LZ7 410 aa17.96■□□□□ 0.47
SMIM4-204ENST00000482728 DCBLD2Q96PD2 775 aa17.96■□□□□ 0.47
SMIM4-204ENST00000482728 FERD3LQ96RJ6 166 aa17.96■□□□□ 0.47
SMIM4-204ENST00000482728 TCF12Q99081 682 aa17.96■□□□□ 0.47
SMIM4-204ENST00000482728 PDP2Q9P2J9 529 aa17.96■□□□□ 0.47
SMIM4-204ENST00000482728 KLHL3Q9UH77 587 aa17.96■□□□□ 0.47
SMIM4-204ENST00000482728 DMXL2Q8TDJ6 3036 aa17.96■□□□□ 0.46
SMIM4-204ENST00000482728 AHCTF1Q8WYP5 2266 aa17.95■□□□□ 0.46
SMIM4-204ENST00000482728 GOLGA8KD6RF30 607 aa17.95■□□□□ 0.46
SMIM4-204ENST00000482728 GOLGA8TH3BQL2 631 aa17.95■□□□□ 0.46
SMIM4-204ENST00000482728 THRAP10827 490 aa17.95■□□□□ 0.46
SMIM4-204ENST00000482728 ITGB6P18564 788 aa17.95■□□□□ 0.46
SMIM4-204ENST00000482728 PDHA2P29803 388 aa17.95■□□□□ 0.46
SMIM4-204ENST00000482728 MAGEA3P43357 314 aa17.95■□□□□ 0.46
SMIM4-204ENST00000482728 MAPK10P53779 464 aa17.95■□□□□ 0.46
SMIM4-204ENST00000482728 THOC5Q13769 683 aaKnown RBP17.95■□□□□ 0.46
SMIM4-204ENST00000482728 BOP1Q14137 746 aaKnown RBP17.95■□□□□ 0.46
SMIM4-204ENST00000482728 DNAJC21Q5F1R6 531 aaKnown RBP17.95■□□□□ 0.46
SMIM4-204ENST00000482728 NEPROQ6NW34 567 aa17.95■□□□□ 0.46
SMIM4-204ENST00000482728 DUS1LQ6P1R4 473 aaKnown RBP17.95■□□□□ 0.46
SMIM4-204ENST00000482728 LRRC6Q86X45 466 aa17.95■□□□□ 0.46
SMIM4-204ENST00000482728 STAMBPL1Q96FJ0 436 aa17.95■□□□□ 0.46
SMIM4-204ENST00000482728 ZDHHC12Q96GR4 267 aa17.95■□□□□ 0.46
SMIM4-204ENST00000482728 SIGLEC10Q96LC7 697 aa17.95■□□□□ 0.46
SMIM4-204ENST00000482728 CARD6Q9BX69 1037 aa17.95■□□□□ 0.46
SMIM4-204ENST00000482728 OR52A5Q9H2C5 316 aa17.95■□□□□ 0.46
SMIM4-204ENST00000482728 ASCL3Q9NQ33 180 aa17.95■□□□□ 0.46
SMIM4-204ENST00000482728 FREM2Q5SZK8 3169 aa17.95■□□□□ 0.46
SMIM4-204ENST00000482728 UBA6A0AVT1 1052 aaPredicted RBP17.94■□□□□ 0.46
SMIM4-204ENST00000482728 SMAPO00193 183 aa17.94■□□□□ 0.46
SMIM4-204ENST00000482728 TLX3O43711 291 aaPredicted RBP17.94■□□□□ 0.46
SMIM4-204ENST00000482728 IVDP26440 423 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms