RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 FAM86C1Q9NVL1 165 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 KLQ9UEF7 1012 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 ZNHIT2Q9UHR6 403 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 ANKRD6Q9Y2G4 727 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 PRSS38A1L453 326 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 GPR89AB7ZAQ6 455 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 TNFRSF10CO14798 259 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 DNAJC6O75061 913 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 EPN2O95208 641 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 FUCA1P04066 466 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 SHBGP04278 402 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 GPR89BP0CG08 455 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 GP5P40197 560 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 MPLP40238 635 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 ABCG1P45844 678 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 CTSCP53634 463 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 ADARP55265 1226 aaKnown RBP11.41□□□□□ -0.58
HPS4-212ENST00000481910 NXPH1P58417 271 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 SRP54P61011 504 aaKnown RBP11.41□□□□□ -0.58
HPS4-212ENST00000481910 PPARDQ03181 441 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 ZNF542PQ5EBM4 170 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 PTRHD1Q6GMV3 140 aaKnown RBP11.41□□□□□ -0.58
HPS4-212ENST00000481910 ZCCHC8Q6NZY4 707 aaKnown RBP11.41□□□□□ -0.58
HPS4-212ENST00000481910 TMEM220Q6QAJ8 160 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 NCCRP1Q6ZVX7 275 aaPredicted RBP11.41□□□□□ -0.58
HPS4-212ENST00000481910 PARGQ86W56 976 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 BPHLQ86WA6 291 aaPredicted RBP11.41□□□□□ -0.58
HPS4-212ENST00000481910 TRAPPC5Q8IUR0 188 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 ESX1Q8N693 406 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 SUMF1Q8NBK3 374 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 ATXN7L3BQ96GX2 97 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 ZNF514Q96K75 400 aaPredicted RBP11.41□□□□□ -0.58
HPS4-212ENST00000481910 BIRC8Q96P09 236 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 P2RY12Q9H244 342 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 PRKAB1Q9Y478 270 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 PCDHGA5Q9Y5G8 931 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 PRSS21Q9Y6M0 314 aa11.41□□□□□ -0.58
HPS4-212ENST00000481910 TDRD6O60522 2096 aaKnown RBP11.4□□□□□ -0.58
HPS4-212ENST00000481910 PATE3B3GLJ2 98 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 GRID2O43424 1007 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 B3GALNT1O75752 331 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 FAM155BO75949 473 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 AP2A2O94973 939 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 ESR1P03372 595 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 INHBAP08476 426 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 OR56A5P0C7T3 313 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 RPS3P23396 243 aaKnown RBP eCLIP11.4□□□□□ -0.58
HPS4-212ENST00000481910 MSH2P43246 934 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 IFFO1Q0D2I5 559 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 TUBA3CQ13748 450 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 CCDC6Q16204 474 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 ALG11Q2TAA5 492 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 KIF19Q2TAC6 998 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 TRIM61Q5EBN2 209 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 GRTP1Q5TC63 336 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 KCTD16Q68DU8 428 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 CRTC3Q6UUV7 619 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 ZC3HC1Q86WB0 502 aaKnown RBP11.4□□□□□ -0.58
HPS4-212ENST00000481910 HID1Q8IV36 788 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 PPP1R14CQ8TAE6 165 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 SLC44A1Q8WWI5 657 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 OR1E3Q8WZA6 343 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 PDXPQ96GD0 296 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 PAFAH2Q99487 392 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 CARS2Q9HA77 564 aaKnown RBP11.4□□□□□ -0.58
HPS4-212ENST00000481910 DNAJC28Q9NX36 388 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 GNPTGQ9UJJ9 305 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 PNMA8BQ9ULN7 279 aaPredicted RBP11.4□□□□□ -0.58
HPS4-212ENST00000481910 GPR34Q9UPC5 381 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 PLAAQ9Y263 795 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 HCN4Q9Y3Q4 1203 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 PCDHB1Q9Y5F3 818 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 RALGAPA1Q6GYQ0 2036 aa11.4□□□□□ -0.58
HPS4-212ENST00000481910 WDFY4Q6ZS81 3184 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 LINC00854A0A1B0GVQ3 168 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 F8W8V4 182 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 QSOX1O00391 747 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 SCAMP1O15126 338 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 RASGRP1O95267 797 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 TNFP01375 233 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 NUDT17P0C025 328 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 PKMP14618 531 aaKnown RBP11.39□□□□□ -0.59
HPS4-212ENST00000481910 SPRP35270 261 aaPredicted RBP11.39□□□□□ -0.59
HPS4-212ENST00000481910 GNPDA1P46926 289 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 BLKP51451 505 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 HK3P52790 923 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 PYCR3Q53H96 274 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 PRAMEF14Q5SWL7 426 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 SLC23A3Q6PIS1 610 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 CHST15Q7LFX5 561 aaPredicted RBP11.39□□□□□ -0.59
HPS4-212ENST00000481910 LRRTM4Q86VH4 590 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 GALNT13Q8IUC8 556 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 ZNF547Q8IVP9 402 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 BEND7Q8N7W2 519 aaPredicted RBP11.39□□□□□ -0.59
HPS4-212ENST00000481910 OR2W6PQ8NHA6 318 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 SCARF2Q96GP6 870 aaPredicted RBP11.39□□□□□ -0.59
HPS4-212ENST00000481910 VPS39Q96JC1 886 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 PHOX2BQ99453 314 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 CGREF1Q99674 301 aa11.39□□□□□ -0.59
HPS4-212ENST00000481910 RBBP8Q99708 897 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms