RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 BPGMP07738 259 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 F7P08709 466 aaPredicted RBP9.97□□□□□ -0.81
USP39-215ENST00000481409 MYL2P10916 166 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 GNSP15586 552 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 CYP2A7P20853 494 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 GRK2P25098 689 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 AVPR2P30518 371 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 SERPINB4P48594 390 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 AP1S2P56377 157 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 DNAJB13P59910 316 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 IRF9Q00978 393 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 CSTF1Q05048 431 aaKnown RBP9.97□□□□□ -0.81
USP39-215ENST00000481409 HSPA14Q0VDF9 509 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 DLG1Q12959 904 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 MPP2Q14168 576 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 ZNF460Q14592 562 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 TEAD4Q15561 434 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 ACSBG2Q5FVE4 666 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 METRNLQ641Q3 311 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 PMS2CLQ68D20 193 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 UNC5DQ6UXZ4 953 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 WASH2PQ6VEQ5 465 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 ZYG11AQ6WRX3 759 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 CYHR1Q6ZMK1 362 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 MICALCLQ6ZW33 695 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 C11orf96Q7Z7L8 435 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 ZNF547Q8IVP9 402 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 PLD6Q8N2A8 252 aaKnown RBP9.97□□□□□ -0.81
USP39-215ENST00000481409 TCAIMQ8N3R3 496 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 TMEM105Q8N8V8 129 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 PNPLA1Q8N8W4 532 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 ANKRD42Q8N9B4 389 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 ARMC2Q8NEN0 867 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 LKAAEAR1Q8TD35 194 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 CKAP2Q8WWK9 683 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 ASB11Q8WXH4 323 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 SNX19Q92543 992 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 MAGEB18Q96M61 343 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 HSPA12BQ96MM6 686 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 OR2M4Q96R27 311 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 SLC12A9Q9BXP2 914 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 CAPS2Q9BXY5 557 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 COG4Q9H9E3 785 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 EBF2Q9HAK2 575 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 FZD3Q9NPG1 666 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 WASH6PQ9NQA3 447 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 AASDHPPTQ9NRN7 309 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 ZSCAN32Q9NX65 697 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 NUDT4Q9NZJ9 180 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 SLC17A7Q9P2U7 560 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 ZNHIT2Q9UHR6 403 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 ADAM21Q9UKJ8 722 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 EMCNQ9ULC0 261 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 CDYLQ9Y232 598 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 OARD1Q9Y530 152 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 PCDHGA2Q9Y5H1 932 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 CEP192Q8TEP8 1941 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 EML5Q05BV3 1969 aa9.97□□□□□ -0.81
USP39-215ENST00000481409 BPTFQ12830 3046 aa9.96□□□□□ -0.81
USP39-215ENST00000481409 A0A1W2PR77 199 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 TMEM202A6NGA9 273 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 H3BM21 787 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 STX16-NPEPL1H3BU86 382 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 IFRD1O00458 451 aaPredicted RBP9.96□□□□□ -0.82
USP39-215ENST00000481409 BTN3A1O00481 513 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 STX16O14662 325 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 VILLO15195 856 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 ZBTB14O43829 449 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 KLK8O60259 260 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 KDM1AO60341 852 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 TRIM13O60858 407 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 CATP04040 527 aaKnown RBP9.96□□□□□ -0.82
USP39-215ENST00000481409 S100BP04271 92 aaPredicted RBP9.96□□□□□ -0.82
USP39-215ENST00000481409 HIST1H2AGP0C0S8 130 aaPredicted RBP9.96□□□□□ -0.82
USP39-215ENST00000481409 THEGLP0DJG4 465 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 SLC2A4P14672 509 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 HIST1H2ADP20671 130 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 IDSP22304 550 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 PXNP49023 591 aaPredicted RBP9.96□□□□□ -0.82
USP39-215ENST00000481409 FNTBP49356 437 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 HNMTP50135 292 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 ATP1A2P50993 1020 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 AFF3P51826 1226 aaKnown RBP9.96□□□□□ -0.82
USP39-215ENST00000481409 WDR4P57081 412 aaKnown RBP9.96□□□□□ -0.82
USP39-215ENST00000481409 CLDN2P57739 230 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 SRP54P61011 504 aaKnown RBP9.96□□□□□ -0.82
USP39-215ENST00000481409 PPARDQ03181 441 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 GALNT1Q10472 559 aaPredicted RBP9.96□□□□□ -0.82
USP39-215ENST00000481409 BOP1Q14137 746 aaKnown RBP9.96□□□□□ -0.82
USP39-215ENST00000481409 LIPMQ5VYY2 423 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 ENPP7Q6UWV6 458 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 FRA10AC1Q70Z53 315 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 RAB44Q7Z6P3 723 aaPredicted RBP9.96□□□□□ -0.82
USP39-215ENST00000481409 TRIM74Q86UV6 250 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 PARGQ86W56 976 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 RASGRP3Q8IV61 690 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 NUDCD3Q8IVD9 361 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 CFAP206Q8IYR0 622 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 RGL4Q8IZJ4 473 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 MAML2Q8IZL2 1156 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms