RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 RARRES3Q9UL19 164 aa11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 TFR2Q9UP52 801 aa11.86□□□□□ -0.51
SQSTM1-207ENST00000481335 IGLV3-16A0A075B6K0 115 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 GRID2IPA4D2P6 1211 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 QSOX1O00391 747 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 PSMD3O43242 534 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 BUD23O43709 281 aaKnown RBP11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 SPAG6O75602 509 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 KIAA0754O94854 1291 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 CCNYL3P0C7X3 344 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 SH3BP2P78314 561 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 HSD11B2P80365 405 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 KCNC4Q03721 635 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 KIF5AQ12840 1032 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 RPA4Q13156 261 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 TUBB3Q13509 450 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 SEPT6Q14141 434 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 PARP6Q2NL67 630 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 DNTTIP2Q5QJE6 756 aaKnown RBP11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 KCTD11Q693B1 232 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 FAM83HQ6ZRV2 1179 aaPredicted RBP11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 ARHGEF18Q6ZSZ5 1173 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 FAM92BQ6ZTR7 304 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 PEX26Q7Z412 305 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 KIAA1328Q86T90 577 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 D2HGDHQ8N465 521 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 CCDC110Q8TBZ0 833 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 ALG3Q92685 438 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 C12orf66Q96MD2 445 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 LACRTQ9GZZ8 138 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 LRRC40Q9H9A6 602 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 SYTL2Q9HCH5 934 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 LATS2Q9NRM7 1088 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 SLC24A2Q9UI40 661 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 ANAPC2Q9UJX6 822 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 PSMD13Q9UNM6 376 aa11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 REXO2Q9Y3B8 237 aaKnown RBP11.85□□□□□ -0.51
SQSTM1-207ENST00000481335 SEC16AO15027 2179 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 IGHV5-51A0A0C4DH38 117 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 TRBV5-4A0A0C4DH59 114 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 UBA6A0AVT1 1052 aaPredicted RBP11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 ERI2A8K979 691 aaKnown RBP11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 NKX2-8O15522 239 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 LDB2O43679 373 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 SGTAO43765 313 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 KIF1CO43896 1103 aaKnown RBP11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 ZBTB11O95625 1053 aaPredicted RBP11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 PTMAP06454 111 aaKnown RBP11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 MSL3P1P0C860 447 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 ATP1B2P14415 290 aaPredicted RBP11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 OAS2P29728 719 aaKnown RBP11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 CA5AP35218 305 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 DLSTP36957 453 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 CD151P48509 253 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 ARL4DP49703 201 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 TUBB4BP68371 445 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 PRKAA1Q13131 559 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 KLF1Q13351 362 aaPredicted RBP11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 TUBB2AQ13885 445 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 CAPRIN2Q6IMN6 1127 aaKnown RBP11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 DENND5AQ6IQ26 1287 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 ARMC6Q6NXE6 501 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 ZNF449Q6P9G9 518 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 RAD9BQ6WBX8 426 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 ACVR1CQ8NER5 493 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 OR13C4Q8NGS5 318 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 C9orf43Q8TAL5 461 aaPredicted RBP11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 STYXQ8WUJ0 223 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 INSM2Q96T92 566 aaPredicted RBP11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 BAG1Q99933 345 aaPredicted RBP11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 TUBB2BQ9BVA1 445 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 GPR87Q9BY21 358 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 FRMD8P1Q9BZ68 369 aaPredicted RBP11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 WWP1Q9H0M0 922 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 LHX9Q9NQ69 397 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 ZDHHC3Q9NYG2 299 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 IMPACTQ9P2X3 320 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 IL17BQ9UHF5 180 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 LNPEPQ9UIQ6 1025 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 CROTQ9UKG9 612 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 PADI1Q9ULC6 663 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 POLHQ9Y253 713 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 BTRCQ9Y297 605 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 DUSP10Q9Y6W6 482 aa11.84□□□□□ -0.51
SQSTM1-207ENST00000481335 IFRD1O00458 451 aaPredicted RBP11.83□□□□□ -0.52
SQSTM1-207ENST00000481335 CPNE3O75131 537 aaKnown RBP11.83□□□□□ -0.52
SQSTM1-207ENST00000481335 AP2A2O94973 939 aa11.83□□□□□ -0.52
SQSTM1-207ENST00000481335 AP2A1O95782 977 aa11.83□□□□□ -0.52
SQSTM1-207ENST00000481335 ZNF28P17035 718 aa11.83□□□□□ -0.52
SQSTM1-207ENST00000481335 PSMA3P25788 255 aa11.83□□□□□ -0.52
SQSTM1-207ENST00000481335 ACRV1P26436 265 aa11.83□□□□□ -0.52
SQSTM1-207ENST00000481335 PBLDP30039 288 aaPredicted RBP11.83□□□□□ -0.52
SQSTM1-207ENST00000481335 MC4RP32245 332 aa11.83□□□□□ -0.52
SQSTM1-207ENST00000481335 LAMB3Q13751 1172 aa11.83□□□□□ -0.52
SQSTM1-207ENST00000481335 PTPRCAPQ14761 206 aa11.83□□□□□ -0.52
SQSTM1-207ENST00000481335 TMTC4Q5T4D3 741 aa11.83□□□□□ -0.52
SQSTM1-207ENST00000481335 DET1Q7L5Y6 550 aa11.83□□□□□ -0.52
SQSTM1-207ENST00000481335 LINC00523Q86TU6 105 aa11.83□□□□□ -0.52
SQSTM1-207ENST00000481335 UNC5BQ8IZJ1 945 aa11.83□□□□□ -0.52
SQSTM1-207ENST00000481335 GALNT6Q8NCL4 622 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms