RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 PRKAA2P54646 552 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 RACK1P63244 317 aaKnown RBP12.35□□□□□ -0.43
SIK3-209ENST00000480222 ARHGAP8P85298 464 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 NFKB2Q00653 900 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 GUCY1A3Q02108 690 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 DMWDQ09019 674 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 HSPA14Q0VDF9 509 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 ASPHQ12797 758 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 LRP8Q14114 963 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 PCLAFQ15004 111 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 PDK4Q16654 411 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 ACSBG2Q5FVE4 666 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 WDR45BQ5MNZ6 344 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 C16orf46Q6P387 395 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 RGS9BPQ6ZS82 235 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 PIWIL4Q7Z3Z4 852 aaKnown RBP12.35□□□□□ -0.43
SIK3-209ENST00000480222 ISCA2Q86U28 154 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 TAX1BP1Q86VP1 789 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 AMZ2Q86W34 360 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 SLC22A15Q8IZD6 547 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 SPATA6LQ8N4H0 392 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 MAGEB18Q96M61 343 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 HSPA12BQ96MM6 686 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 OR2M4Q96R27 311 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 ATOH8Q96SQ7 321 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 PAIP2Q9BPZ3 127 aaKnown RBP12.35□□□□□ -0.43
SIK3-209ENST00000480222 DPEP2Q9H4A9 486 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 ALG9Q9H6U8 611 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 FGF22Q9HCT0 170 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 MLXIPLQ9NP71 852 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 SIRPGQ9P1W8 387 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 KLQ9UEF7 1012 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 CDYLQ9Y232 598 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 CEP192Q8TEP8 1941 aa12.35□□□□□ -0.43
SIK3-209ENST00000480222 WDFY4Q6ZS81 3184 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 KMT2EQ8IZD2 1858 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 SRRM3A6NNA2 597 aaPredicted RBP12.34□□□□□ -0.43
SIK3-209ENST00000480222 TARM1B6A8C7 271 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 G3V2L1 256 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 SLC16A5O15375 505 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 SMIM24O75264 130 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 BPGMP07738 259 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 CPA3P15088 417 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 BCKDHBP21953 392 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 ATP5F1P24539 256 aaPredicted RBP12.34□□□□□ -0.43
SIK3-209ENST00000480222 PBLDP30039 288 aaPredicted RBP12.34□□□□□ -0.43
SIK3-209ENST00000480222 FNTBP49356 437 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 TSNQ15631 228 aaKnown RBP12.34□□□□□ -0.43
SIK3-209ENST00000480222 ZNF528Q3MIS6 628 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 PYCR3Q53H96 274 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 TSSK4Q6SA08 328 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 Q6ZSR6 202 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 FRA10AC1Q70Z53 315 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 LPCAT2Q7L5N7 544 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 ALYREFQ86V81 257 aaKnown RBP12.34□□□□□ -0.43
SIK3-209ENST00000480222 SLC22A9Q8IVM8 553 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 MAML2Q8IZL2 1156 aaPredicted RBP12.34□□□□□ -0.43
SIK3-209ENST00000480222 TMEM151AQ8N4L1 468 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 MFSD2AQ8NA29 543 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 OR13H1Q8NG92 308 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 CKAP2Q8WWK9 683 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 GAB3Q8WWW8 586 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 DNASE2BQ8WZ79 361 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 PTERQ96BW5 349 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 SLC6A18Q96N87 628 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 C12orf65Q9H3J6 166 aaKnown RBP12.34□□□□□ -0.43
SIK3-209ENST00000480222 AASDHPPTQ9NRN7 309 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 NUDT4Q9NZJ9 180 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 CPSF2Q9P2I0 782 aaKnown RBP12.34□□□□□ -0.43
SIK3-209ENST00000480222 ADAM21Q9UKJ8 722 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 RNF112Q9ULX5 631 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 SUFUQ9UMX1 484 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 CA5BQ9Y2D0 317 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 DGKBQ9Y6T7 804 aa12.34□□□□□ -0.43
SIK3-209ENST00000480222 TNRC6BQ9UPQ9 1833 aaKnown RBP12.33□□□□□ -0.44
SIK3-209ENST00000480222 PABPN1LA6NDY0 278 aaKnown RBP12.33□□□□□ -0.44
SIK3-209ENST00000480222 H3BM21 787 aa12.33□□□□□ -0.44
SIK3-209ENST00000480222 KLF11O14901 512 aa12.33□□□□□ -0.44
SIK3-209ENST00000480222 SHOX2O60902 331 aaPredicted RBP12.33□□□□□ -0.44
SIK3-209ENST00000480222 SBK3P0C264 359 aa12.33□□□□□ -0.44
SIK3-209ENST00000480222 THEGLP0DJG4 465 aa12.33□□□□□ -0.44
SIK3-209ENST00000480222 TPBGLP0DKB5 382 aa12.33□□□□□ -0.44
SIK3-209ENST00000480222 CNR2P34972 360 aa12.33□□□□□ -0.44
SIK3-209ENST00000480222 GYS2P54840 703 aa12.33□□□□□ -0.44
SIK3-209ENST00000480222 NAA20P61599 178 aa12.33□□□□□ -0.44
SIK3-209ENST00000480222 IRX4P78413 519 aa12.33□□□□□ -0.44
SIK3-209ENST00000480222 CSTF1Q05048 431 aaKnown RBP12.33□□□□□ -0.44
SIK3-209ENST00000480222 OR4D1Q15615 310 aa12.33□□□□□ -0.44
SIK3-209ENST00000480222 PPP1R3AQ16821 1122 aa12.33□□□□□ -0.44
SIK3-209ENST00000480222 PLA2G4EQ3MJ16 856 aa12.33□□□□□ -0.44
SIK3-209ENST00000480222 CDKL4Q5MAI5 379 aa12.33□□□□□ -0.44
SIK3-209ENST00000480222 LIPMQ5VYY2 423 aa12.33□□□□□ -0.44
SIK3-209ENST00000480222 SBSNQ6UWP8 590 aa12.33□□□□□ -0.44
SIK3-209ENST00000480222 ENPP7Q6UWV6 458 aa12.33□□□□□ -0.44
SIK3-209ENST00000480222 PDZD3Q86UT5 571 aa12.33□□□□□ -0.44
SIK3-209ENST00000480222 PARGQ86W56 976 aa12.33□□□□□ -0.44
SIK3-209ENST00000480222 NUDCD3Q8IVD9 361 aa12.33□□□□□ -0.44
SIK3-209ENST00000480222 SLC22A18ASQ8N1D0 253 aa12.33□□□□□ -0.44
SIK3-209ENST00000480222 LRRC8CQ8TDW0 803 aa12.33□□□□□ -0.44
SIK3-209ENST00000480222 SKA2Q8WVK7 121 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms