RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 SLC35G4P0C7Q5 338 aa19.33■□□□□ 0.68
LIME1-205ENST00000480139 PKMP14618 531 aaKnown RBP19.33■□□□□ 0.68
LIME1-205ENST00000480139 SSTR1P30872 391 aa19.33■□□□□ 0.68
LIME1-205ENST00000480139 FMO4P31512 558 aa19.33■□□□□ 0.68
LIME1-205ENST00000480139 GPR3P46089 330 aa19.33■□□□□ 0.68
LIME1-205ENST00000480139 CD151P48509 253 aa19.33■□□□□ 0.68
LIME1-205ENST00000480139 GPX6P59796 221 aa19.33■□□□□ 0.68
LIME1-205ENST00000480139 UBE2IP63279 158 aaKnown RBP19.33■□□□□ 0.68
LIME1-205ENST00000480139 MPP1Q00013 466 aa19.33■□□□□ 0.68
LIME1-205ENST00000480139 E2F1Q01094 437 aa19.33■□□□□ 0.68
LIME1-205ENST00000480139 SEPT7Q16181 437 aaKnown RBP19.33■□□□□ 0.68
LIME1-205ENST00000480139 C3orf62Q6ZUJ4 267 aa19.33■□□□□ 0.68
LIME1-205ENST00000480139 SLC26A11Q86WA9 606 aa19.33■□□□□ 0.68
LIME1-205ENST00000480139 RBM12BQ8IXT5 1001 aaKnown RBP19.33■□□□□ 0.68
LIME1-205ENST00000480139 LILRA3Q8N6C8 439 aaPredicted RBP19.33■□□□□ 0.68
LIME1-205ENST00000480139 ASZ1Q8WWH4 475 aa19.33■□□□□ 0.68
LIME1-205ENST00000480139 CCDC74AQ96AQ1 378 aa19.33■□□□□ 0.68
LIME1-205ENST00000480139 OR52A5Q9H2C5 316 aa19.33■□□□□ 0.68
LIME1-205ENST00000480139 LRRC4CQ9HCJ2 640 aa19.33■□□□□ 0.68
LIME1-205ENST00000480139 NSMCE4AQ9NXX6 385 aa19.33■□□□□ 0.68
LIME1-205ENST00000480139 LRIT1Q9P2V4 623 aa19.33■□□□□ 0.68
LIME1-205ENST00000480139 CPNE7Q9UBL6 633 aa19.33■□□□□ 0.68
LIME1-205ENST00000480139 CORO1CQ9ULV4 474 aaPredicted RBP19.33■□□□□ 0.68
LIME1-205ENST00000480139 RNF215Q9Y6U7 377 aa19.33■□□□□ 0.68
LIME1-205ENST00000480139 TCRBV9S1A1TA0A576 114 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 HAUS5O94927 633 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 TRIM16O95361 564 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 AOAHP28039 575 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 TNFRSF8P28908 595 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 CCR7P32248 378 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 HHEXQ03014 270 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 ILF2Q12905 390 aaKnown RBP19.32■□□□□ 0.68
LIME1-205ENST00000480139 CLCA4Q14CN2 919 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 SYTL3Q4VX76 610 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 PERM1Q5SV97 790 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 CAPRIN2Q6IMN6 1127 aaKnown RBP19.32■□□□□ 0.68
LIME1-205ENST00000480139 WDR48Q8TAF3 677 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 LKAAEAR1Q8TD35 194 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 ADAMTS14Q8WXS8 1223 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 CDKL2Q92772 493 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 KCNJ9Q92806 393 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 TMEM159Q96B96 161 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 SH3KBP1Q96B97 665 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 WWP1Q9H0M0 922 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 CCDC68Q9H2F9 335 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 UCK1Q9HA47 277 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 LATS2Q9NRM7 1088 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 ZNF624Q9P2J8 865 aaPredicted RBP19.32■□□□□ 0.68
LIME1-205ENST00000480139 FAM8A1Q9UBU6 413 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 NFU1Q9UMS0 254 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 PSMD13Q9UNM6 376 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 CACNA1AO00555 2505 aa19.32■□□□□ 0.68
LIME1-205ENST00000480139 RHPN2P1A8MT19 583 aa19.31■□□□□ 0.68
LIME1-205ENST00000480139 IQCF5A8MTL0 148 aa19.31■□□□□ 0.68
LIME1-205ENST00000480139 PPM1DO15297 605 aa19.31■□□□□ 0.68
LIME1-205ENST00000480139 ZW10O43264 779 aa19.31■□□□□ 0.68
LIME1-205ENST00000480139 GPC4O75487 556 aa19.31■□□□□ 0.68
LIME1-205ENST00000480139 AHSGP02765 367 aa19.31■□□□□ 0.68
LIME1-205ENST00000480139 APOA4P06727 396 aa19.31■□□□□ 0.68
LIME1-205ENST00000480139 GABRB3P28472 473 aa19.31■□□□□ 0.68
LIME1-205ENST00000480139 STX2P32856 288 aa19.31■□□□□ 0.68
LIME1-205ENST00000480139 SLC19A1P41440 591 aa19.31■□□□□ 0.68
LIME1-205ENST00000480139 BIRC2Q13490 618 aa19.31■□□□□ 0.68
LIME1-205ENST00000480139 BOP1Q14137 746 aaKnown RBP19.31■□□□□ 0.68
LIME1-205ENST00000480139 SLMAPQ14BN4 828 aa19.31■□□□□ 0.68
LIME1-205ENST00000480139 TMED2Q15363 201 aa19.31■□□□□ 0.68
LIME1-205ENST00000480139 RPE65Q16518 533 aa19.31■□□□□ 0.68
LIME1-205ENST00000480139 ZNF549Q6P9A3 640 aa19.31■□□□□ 0.68
LIME1-205ENST00000480139 CNSTQ6PJW8 725 aa19.31■□□□□ 0.68
LIME1-205ENST00000480139 CAPN12Q6ZSI9 719 aa19.31■□□□□ 0.68
LIME1-205ENST00000480139 PDZD3Q86UT5 571 aa19.31■□□□□ 0.68
LIME1-205ENST00000480139 KRT222Q8N1A0 295 aa19.31■□□□□ 0.68
LIME1-205ENST00000480139 RMDN2Q96LZ7 410 aa19.31■□□□□ 0.68
LIME1-205ENST00000480139 CCDC3Q9BQI4 270 aa19.31■□□□□ 0.68
LIME1-205ENST00000480139 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.31■□□□□ 0.68
LIME1-205ENST00000480139 KLHL42Q9P2K6 505 aa19.31■□□□□ 0.68
LIME1-205ENST00000480139 CDYLQ9Y232 598 aa19.31■□□□□ 0.68
LIME1-205ENST00000480139 HEBP2Q9Y5Z4 205 aa19.31■□□□□ 0.68
LIME1-205ENST00000480139 FAM159BA6NKW6 160 aa19.3■□□□□ 0.68
LIME1-205ENST00000480139 OR52A4PA6NMU1 304 aa19.3■□□□□ 0.68
LIME1-205ENST00000480139 NIPSNAP2O75323 286 aa19.3■□□□□ 0.68
LIME1-205ENST00000480139 SLCO2B1O94956 709 aa19.3■□□□□ 0.68
LIME1-205ENST00000480139 C1QAP02745 245 aa19.3■□□□□ 0.68
LIME1-205ENST00000480139 MTHFD1P11586 935 aaKnown RBP19.3■□□□□ 0.68
LIME1-205ENST00000480139 KCNA4P22459 653 aa19.3■□□□□ 0.68
LIME1-205ENST00000480139 PREPP48147 710 aa19.3■□□□□ 0.68
LIME1-205ENST00000480139 PLEKHS1Q5SXH7 462 aa19.3■□□□□ 0.68
LIME1-205ENST00000480139 OTOAQ7RTW8 1153 aa19.3■□□□□ 0.68
LIME1-205ENST00000480139 SPRED1Q7Z699 444 aa19.3■□□□□ 0.68
LIME1-205ENST00000480139 TRIM48Q8IWZ4 208 aa19.3■□□□□ 0.68
LIME1-205ENST00000480139 SLC22A15Q8IZD6 547 aa19.3■□□□□ 0.68
LIME1-205ENST00000480139 ZFPM2Q8WW38 1151 aa19.3■□□□□ 0.68
LIME1-205ENST00000480139 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.3■□□□□ 0.683e-7■□□□□ 10.3
LIME1-205ENST00000480139 CXorf40BQ96DE9 158 aa19.3■□□□□ 0.68
LIME1-205ENST00000480139 INSM2Q96T92 566 aaPredicted RBP19.3■□□□□ 0.68
LIME1-205ENST00000480139 AARSD1Q9BTE6 412 aaKnown RBP19.3■□□□□ 0.68
LIME1-205ENST00000480139 SLC40A1Q9NP59 571 aa19.3■□□□□ 0.68
LIME1-205ENST00000480139 RABGEF1Q9UJ41 708 aa19.3■□□□□ 0.68
LIME1-205ENST00000480139 ASXL3Q9C0F0 2248 aa19.3■□□□□ 0.68
LIME1-205ENST00000480139 RP1P56715 2156 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms