RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 PRKCGP05129 697 aa5.88□□□□□ -1.47
CPS1-207ENST00000479988 DHRS4L1P0CG22 281 aa5.88□□□□□ -1.47
CPS1-207ENST00000479988 CD27P26842 260 aa5.88□□□□□ -1.47
CPS1-207ENST00000479988 SEPHS1P49903 392 aa5.88□□□□□ -1.47
CPS1-207ENST00000479988 RPL14P50914 215 aaKnown RBP5.88□□□□□ -1.47
CPS1-207ENST00000479988 RAB10P61026 200 aa5.88□□□□□ -1.47
CPS1-207ENST00000479988 KLC1Q07866 573 aa5.88□□□□□ -1.47
CPS1-207ENST00000479988 CDC16Q13042 620 aa5.88□□□□□ -1.47
CPS1-207ENST00000479988 PRKG2Q13237 762 aa5.88□□□□□ -1.47
CPS1-207ENST00000479988 ZNHIT3Q15649 155 aaPredicted RBP5.88□□□□□ -1.47
CPS1-207ENST00000479988 ZNF542PQ5EBM4 170 aa5.88□□□□□ -1.47
CPS1-207ENST00000479988 KIAA0930Q6ICG6 404 aaPredicted RBP5.88□□□□□ -1.47
CPS1-207ENST00000479988 FAM45BPQ6NSW5 357 aa5.88□□□□□ -1.47
CPS1-207ENST00000479988 TRMT10BQ6PF06 316 aaKnown RBP5.88□□□□□ -1.47
CPS1-207ENST00000479988 PAGE2Q7Z2X7 111 aa5.88□□□□□ -1.47
CPS1-207ENST00000479988 NET1Q7Z628 596 aaPredicted RBP5.88□□□□□ -1.47
CPS1-207ENST00000479988 HEATR4Q86WZ0 1026 aa5.88□□□□□ -1.47
CPS1-207ENST00000479988 SNIP1Q8TAD8 396 aaKnown RBP5.88□□□□□ -1.47
CPS1-207ENST00000479988 RIN3Q8TB24 985 aa5.88□□□□□ -1.47
CPS1-207ENST00000479988 FAM45AQ8TCE6 357 aa5.88□□□□□ -1.47
CPS1-207ENST00000479988 LRRC46Q96FV0 321 aa5.88□□□□□ -1.47
CPS1-207ENST00000479988 GBP5Q96PP8 586 aa5.88□□□□□ -1.47
CPS1-207ENST00000479988 BBS4Q96RK4 519 aa5.88□□□□□ -1.47
CPS1-207ENST00000479988 CNPPD1Q9BV87 410 aa5.88□□□□□ -1.47
CPS1-207ENST00000479988 NDEL1Q9GZM8 345 aa5.88□□□□□ -1.47
CPS1-207ENST00000479988 MRM3Q9HC36 420 aaKnown RBP5.88□□□□□ -1.47
CPS1-207ENST00000479988 DOCK3Q8IZD9 2030 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 SLC22A2O15244 555 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 HOXC11O43248 304 aaPredicted RBP5.87□□□□□ -1.47
CPS1-207ENST00000479988 HSD17B2P37059 387 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 MC1RQ01726 317 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 SLC34A1Q06495 639 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 ZC3H12BQ5HYM0 836 aaKnown RBP5.87□□□□□ -1.47
CPS1-207ENST00000479988 AAGABQ6PD74 315 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 TSSK4Q6SA08 328 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 GPSM1Q86YR5 675 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 FBXO39Q8N4B4 442 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 FAM98AQ8NCA5 519 aaKnown RBP5.87□□□□□ -1.47
CPS1-207ENST00000479988 CHFRQ96EP1 664 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 MPP4Q96JB8 637 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 CSNK1G1Q9HCP0 422 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 C19orf25Q9UFG5 118 aaPredicted RBP5.87□□□□□ -1.47
CPS1-207ENST00000479988 RARRES3Q9UL19 164 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 RFPL1O75677 317 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 FYNP06241 537 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 CRADDP78560 199 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 SLC10A7Q0GE19 358 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 STX4Q12846 297 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 CCDC142Q17RM4 750 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 PRAMEF14Q5SWL7 426 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 CACHD1Q5VU97 1274 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 C16orf46Q6P387 395 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 Q6ZSR6 202 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 TMEM135Q86UB9 458 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 IGDCC3Q8IVU1 814 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 AGAP11Q8TF27 550 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 KHSRPQ92945 711 aaKnown RBP eCLIP5.87□□□□□ -1.47
CPS1-207ENST00000479988 CCDC28BQ9BUN5 200 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 ERVK-11Q9UQG0 969 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 COL11A1P12107 1806 aaPredicted RBP5.87□□□□□ -1.47
CPS1-207ENST00000479988 A0A1B0GVT2 93 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 TMEM150CB9EJG8 249 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 TP73O15350 636 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 GSC2O15499 205 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 POP7O75817 140 aaKnown RBP5.87□□□□□ -1.47
CPS1-207ENST00000479988 LTA4HP09960 611 aaKnown RBP5.87□□□□□ -1.47
CPS1-207ENST00000479988 TYRP1P17643 537 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 PREPP48147 710 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 MASP1P48740 699 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 SLC10A2Q12908 348 aaPredicted RBP5.87□□□□□ -1.47
CPS1-207ENST00000479988 KPNB1Q14974 876 aaKnown RBP5.87□□□□□ -1.47
CPS1-207ENST00000479988 TAF1AQ15573 450 aaPredicted RBP5.87□□□□□ -1.47
CPS1-207ENST00000479988 FAM214AQ32MH5 1076 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 FUT11Q495W5 492 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 RAB41Q5JT25 222 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 C6orf10Q5SRN2 563 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 FAM91A1Q658Y4 838 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 CES3Q6UWW8 571 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 Q6ZVL8 140 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 USP30Q70CQ3 517 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 DGLUCYQ7Z3D6 616 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 PEX13Q92968 403 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 NCLNQ969V3 563 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 SDCCAG3Q96C92 435 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 KIFC1Q9BW19 673 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 ACSL5Q9ULC5 683 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 EIF3LQ9Y262 564 aaKnown RBP5.87□□□□□ -1.47
CPS1-207ENST00000479988 TCAF1Q9Y4C2 921 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 PKMP14618 531 aaKnown RBP5.87□□□□□ -1.47
CPS1-207ENST00000479988 VAV1P15498 845 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 ITGB7P26010 798 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 NRG1Q02297 640 aaPredicted RBP5.87□□□□□ -1.47
CPS1-207ENST00000479988 CYLC2Q14093 348 aaPredicted RBP5.87□□□□□ -1.47
CPS1-207ENST00000479988 EML3Q32P44 896 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 ALFQ53S48 1182 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 LRRC66Q68CR7 880 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 SYT13Q7L8C5 426 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 SNX20Q7Z614 316 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 PRSS58Q8IYP2 241 aa5.87□□□□□ -1.47
CPS1-207ENST00000479988 ADGRG2Q8IZP9 1017 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms