RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 SOCS4Q8WXH5 440 aa13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 HDAC2Q92769 488 aaKnown RBP13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 EXOC2Q96KP1 924 aa13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 ZNF641Q96N77 438 aaPredicted RBP13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 CDK15Q96Q40 435 aa13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 TMEM248Q9NWD8 314 aa13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 G3V2T6 193 aa13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 CDC7O00311 574 aa13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 DEAF1O75398 565 aaPredicted RBP13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 ENO2P09104 434 aaPredicted RBP13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 PABPC1P11940 636 aaKnown RBP13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 TYMPP19971 482 aa13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 TGM1P22735 817 aa13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 SLC26A3P40879 764 aa13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 CDKN1CP49918 316 aaPredicted RBP13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 DGKQP52824 942 aa13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 TPD52P55327 224 aaPredicted RBP13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 MAPK11Q15759 364 aa13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 KCNJ8Q15842 424 aa13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 ADPRMQ3LIE5 342 aa13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 C10orf120Q5SQS8 335 aa13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 VARS2Q5ST30 1063 aaKnown RBP13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 TMEM236Q5W0B7 351 aa13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 SULT1C3Q6IMI6 304 aa13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 ZDHHC13Q8IUH4 622 aa13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 GPR62Q9BZJ7 368 aa13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 GALPQ9UBC7 116 aa13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 POU2F3Q9UKI9 436 aa13.13□□□□□ -0.31
PDZRN3-208ENST00000479530 NT5C1B-RDH14C9J2C7 533 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 SLC2A3P11169 496 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 BMP4P12644 408 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 RGRP47804 291 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 OCA2Q04671 838 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 PRKCZQ05513 592 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 CARTPTQ16568 116 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 SETMARQ53H47 684 aaPredicted RBP13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 PAGE2BQ5JRK9 111 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 PAQR3Q6TCH7 311 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 CCDC80Q76M96 950 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 TMEM179BQ7Z7N9 219 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 PROSER1Q86XN7 944 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 HID1Q8IV36 788 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 FBXO39Q8N4B4 442 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 GIPC2Q8TF65 315 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 FRS2Q8WU20 508 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 ASB2Q96Q27 587 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 TRIM62Q9BVG3 475 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 HMG20AQ9NP66 347 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 MARCH2Q9P0N8 246 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 NEUROG3Q9Y4Z2 214 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 LOC285095A0A1B0GVY8 99 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 ECI2O75521 394 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 OAZ2O95190 189 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 RAP2AP10114 183 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 OR1E1P30953 314 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 TGFBR1P36897 503 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 SPATS1Q496A3 300 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 XKR7Q5GH72 579 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 MFSD4AQ8N468 514 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 TEX26Q8N6G2 289 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 FNDC5Q8NAU1 212 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 CNIH3Q8TBE1 160 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 FIG4Q92562 907 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 FBXO32Q969P5 355 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 MAGED4Q96JG8 741 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 ZNF599Q96NL3 588 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 ZBED2Q9BTP6 218 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 BRINP2Q9C0B6 783 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 KLHL25Q9H0H3 589 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 SCUBE2Q9NQ36 999 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 RNF112Q9ULX5 631 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 FNDC3AQ9Y2H6 1198 aaKnown RBP13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 MED16Q9Y2X0 877 aa13.12□□□□□ -0.31
PDZRN3-208ENST00000479530 PTPRDP23468 1912 aa13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 SLC1A7O00341 560 aa13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 CD3EAPO15446 510 aaKnown RBP13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 SEPT4O43236 478 aa13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 VNN2O95498 520 aa13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 VBP1P61758 197 aa13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 NRG1Q02297 640 aaPredicted RBP13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 EMX1Q04741 257 aaPredicted RBP13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 DSC1Q08554 894 aa13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 SERINC3Q13530 473 aa13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 C6orf136Q5SQH8 315 aa13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 CCSAPQ6IQ19 270 aaPredicted RBP13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 GLB1LQ6UWU2 654 aa13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 SCAIQ8N9R8 606 aa13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 OR7D4Q8NG98 312 aa13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 TADA1Q96BN2 335 aa13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 ACTL8Q9H568 366 aa13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 SIAEQ9HAT2 523 aa13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 SPC25Q9HBM1 224 aa13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 NMRK2Q9NPI5 230 aa13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 TMED5Q9Y3A6 229 aa13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 SPO11Q9Y5K1 396 aa13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 IGLV3-10A0A075B6K4 115 aa13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 FAM92AA1XBS5 289 aa13.11□□□□□ -0.31
PDZRN3-208ENST00000479530 MANSC4A6NHS7 340 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms