RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 EFHC1Q5JVL4 640 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 GCNT6Q5T4J0 391 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 ZNF626Q68DY1 528 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 MEPCEQ7L2J0 689 aaKnown RBP4.99□□□□□ -1.61
UPF3B-203ENST00000478840 SPATA21Q7Z572 469 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 MRPL10Q7Z7H8 261 aaKnown RBP4.99□□□□□ -1.61
UPF3B-203ENST00000478840 TLK2Q86UE8 772 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 TUSC5Q8IXB3 177 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 SLC4A11Q8NBS3 891 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 HMGCLL1Q8TB92 370 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 TXNDC15Q96J42 360 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 FAM81BQ96LP2 452 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 CMKLR1Q99788 373 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 SLC25A33Q9BSK2 321 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 FOXP1Q9H334 677 aaPredicted RBP4.99□□□□□ -1.61
UPF3B-203ENST00000478840 MMADHCQ9H3L0 296 aaPredicted RBP4.99□□□□□ -1.61
UPF3B-203ENST00000478840 MRPL44Q9H9J2 332 aaKnown RBP4.99□□□□□ -1.61
UPF3B-203ENST00000478840 IL1RAPL2Q9NP60 686 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 ERAP1Q9NZ08 941 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 COQ3Q9NZJ6 369 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 FZD10Q9ULW2 581 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 ABT1Q9ULW3 272 aaKnown RBP4.99□□□□□ -1.61
UPF3B-203ENST00000478840 GPRASP1Q5JY77 1395 aa4.99□□□□□ -1.61
UPF3B-203ENST00000478840 ZNF804BA4D1E1 1349 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 SLC22A3O75751 556 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 SYF2O95926 243 aaKnown RBP4.98□□□□□ -1.61
UPF3B-203ENST00000478840 LDLRP01130 860 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 SLPIP03973 132 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 EEF2P13639 858 aaKnown RBP4.98□□□□□ -1.61
UPF3B-203ENST00000478840 HOXD3P31249 432 aaPredicted RBP4.98□□□□□ -1.61
UPF3B-203ENST00000478840 TIA1P31483 386 aaKnown RBP eCLIP4.98□□□□□ -1.61
UPF3B-203ENST00000478840 SLC9A3P48764 834 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 AMPHP49418 695 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 C17orf67Q0P5P2 114 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 Q0VFX4 171 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 PNRC1Q12796 327 aaPredicted RBP4.98□□□□□ -1.61
UPF3B-203ENST00000478840 RRS1Q15050 365 aaKnown RBP4.98□□□□□ -1.61
UPF3B-203ENST00000478840 TWIST1Q15672 202 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 EZH2Q15910 746 aaKnown RBP4.98□□□□□ -1.61
UPF3B-203ENST00000478840 PRTGQ2VWP7 1150 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 C2orf76Q3KRA6 126 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 RGMBQ6NW40 437 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 C8orf82Q6P1X6 216 aaPredicted RBP4.98□□□□□ -1.61
UPF3B-203ENST00000478840 WDR73Q6P4I2 378 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 GBP6Q6ZN66 633 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 GLCCI1Q86VQ1 547 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 C1orf52Q8N6N3 182 aaKnown RBP4.98□□□□□ -1.61
UPF3B-203ENST00000478840 NANOGP1Q8N7R0 232 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.98□□□□□ -1.61
UPF3B-203ENST00000478840 NHLRC2Q8NBF2 726 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 DENND1AQ8TEH3 1009 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 SLC44A1Q8WWI5 657 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 DNASE1L2Q92874 299 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 MTERF1Q99551 399 aaKnown RBP4.98□□□□□ -1.61
UPF3B-203ENST00000478840 CPNE1Q99829 537 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 KATNB1Q9BVA0 655 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 SLA2Q9H6Q3 261 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 MYNNQ9NPC7 610 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 NOX4Q9NPH5 578 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 CACNG4Q9UBN1 327 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 POLLQ9UGP5 575 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 FRMD4BQ9Y2L6 1034 aa4.98□□□□□ -1.61
UPF3B-203ENST00000478840 hDV102S1A0JD36 115 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 LRRD1A4D1F6 860 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 OR6C75A6NL08 312 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 INAFM1C9JVW0 142 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 ZNF263O14978 683 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 HTATSF1O43719 755 aaKnown RBP4.97□□□□□ -1.61
UPF3B-203ENST00000478840 VIMP08670 466 aaKnown RBP4.97□□□□□ -1.61
UPF3B-203ENST00000478840 GNAZP19086 355 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 S1PR1P21453 382 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 TKTP29401 623 aaKnown RBP4.97□□□□□ -1.61
UPF3B-203ENST00000478840 C21orf33P30042 268 aaPredicted RBP4.97□□□□□ -1.61
UPF3B-203ENST00000478840 MMP13P45452 471 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 CRKLP46109 303 aaKnown RBP4.97□□□□□ -1.61
UPF3B-203ENST00000478840 POLR2LP62875 67 aaKnown RBP4.97□□□□□ -1.61
UPF3B-203ENST00000478840 PPATQ06203 517 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 SRSF4Q08170 494 aaKnown RBP4.97□□□□□ -1.61
UPF3B-203ENST00000478840 TDRD12Q587J7 1177 aaKnown RBP4.97□□□□□ -1.61
UPF3B-203ENST00000478840 MTX3Q5HYI7 312 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 GRTP1Q5TC63 336 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 FAM122CQ6P4D5 195 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 HOOK3Q86VS8 718 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 ZNF34Q8IZ26 560 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 ARL10Q8N8L6 244 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 SPC24Q8NBT2 197 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 OR8H1Q8NGG4 311 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 MGARPQ8TDB4 240 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 SMPDL3BQ92485 455 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 CABS1Q96KC9 395 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 SFXN2Q96NB2 322 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 PARK7Q99497 189 aaKnown RBP4.97□□□□□ -1.61
UPF3B-203ENST00000478840 SLX1AQ9BQ83 275 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 BTBD10Q9BSF8 475 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 LMF2Q9BU23 707 aaKnown RBP4.97□□□□□ -1.61
UPF3B-203ENST00000478840 EBF3Q9H4W6 596 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 TBC1D17Q9HA65 648 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 ABCB8Q9NUT2 735 aa4.97□□□□□ -1.61
UPF3B-203ENST00000478840 ARMCX3Q9UH62 379 aaPredicted RBP4.97□□□□□ -1.61
UPF3B-203ENST00000478840 TAF1P21675 1872 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms