RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 VEGFDO43915 354 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 NUAK1O60285 661 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 STK17BO94768 372 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 SLC25A14O95258 325 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-214ENST00000477152 PEX11BO96011 259 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 HALP42357 657 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 SPINT3P49223 89 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 GSK3AP49840 483 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 PDE1BQ01064 536 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 FOXM1Q08050 763 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 SF1Q15637 639 aaKnown RBP7.15□□□□□ -1.26
BRCA1-214ENST00000477152 INSCQ1MX18 579 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 ANO6Q4KMQ2 910 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 LACTB2Q53H82 288 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-214ENST00000477152 KCTD16Q68DU8 428 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 ARHGAP22Q7Z5H3 698 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 TSPAN33Q86UF1 283 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 RASGRP3Q8IV61 690 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 CCDC13Q8IYE1 715 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 BRSK1Q8TDC3 778 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 STAMBPL1Q96FJ0 436 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 TTC25Q96NG3 672 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 SPATA16Q9BXB7 569 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 TRIM4Q9C037 500 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 BRD8Q9H0E9 1235 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 OSGEPL1Q9H4B0 414 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 TRIM39Q9HCM9 518 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 PDE7BQ9NP56 450 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 OCIAD1Q9NX40 245 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 CPNE7Q9UBL6 633 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 PILRAQ9UKJ1 303 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 CHKBQ9Y259 395 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 LAMA5O15230 3695 aa7.15□□□□□ -1.26
BRCA1-214ENST00000477152 TRBV23OR9-2A0A075B6M9 112 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 SHISA3A0PJX4 238 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 ANKRD66B4E2M5 251 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 GOLGA6L19H0YKK7 550 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 CASC3O15234 703 aaKnown RBP7.15□□□□□ -1.27
BRCA1-214ENST00000477152 DNAJC6O75061 913 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 CLDN7O95471 211 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 TPM1P09493 284 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 H2AFZP0C0S5 128 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 ACP5P13686 325 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 XRCC1P18887 633 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-214ENST00000477152 IDSP22304 550 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 IL1R2P27930 398 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 CSF2RBP32927 897 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 DCDC1P59894 354 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 PPP2R2AP63151 447 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 CYP4F2P78329 520 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 ZBED6P86452 979 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 KLRB1Q12918 225 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 SRSF6Q13247 344 aaKnown RBP7.15□□□□□ -1.27
BRCA1-214ENST00000477152 CLCA4Q14CN2 919 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 FAM209AQ5JX71 171 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 CYP4V2Q6ZWL3 525 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-214ENST00000477152 H2AFVQ71UI9 128 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 APTXQ7Z2E3 356 aaKnown RBP7.15□□□□□ -1.27
BRCA1-214ENST00000477152 LRRTM4Q86VH4 590 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 PELI3Q8N2H9 469 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 TRAM1L1Q8N609 369 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 FAM71BQ8TC56 605 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 RNF141Q8WVD5 230 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 PATE1Q8WXA2 126 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 CTNNBL1Q8WYA6 563 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-214ENST00000477152 STARD8Q92502 1023 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 SCAMP4Q969E2 229 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 HDAC11Q96DB2 347 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 CXorf40BQ96DE9 158 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 FCRL4Q96PJ5 515 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 GPR63Q9BZJ6 419 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 ULBP3Q9BZM4 244 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 MAGEE1Q9HCI5 957 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 POT1Q9NUX5 634 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 ZNHIT6Q9NWK9 470 aaKnown RBP7.15□□□□□ -1.27
BRCA1-214ENST00000477152 GFOD1Q9NXC2 390 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 CTTNBP2NLQ9P2B4 639 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 STOML1Q9UBI4 398 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 POLHQ9Y253 713 aa7.15□□□□□ -1.27
BRCA1-214ENST00000477152 LUC7L2Q9Y383 392 aaKnown RBP7.15□□□□□ -1.27
BRCA1-214ENST00000477152 KLHL33A6NCF5 533 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 RASSF9O75901 435 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 UBXN7O94888 489 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 FUCA1P04066 466 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 CYP1A2P05177 515 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 PDHA1P08559 390 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 SKILP12757 684 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 DSC2Q02487 901 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 SLC25A11Q02978 314 aaKnown RBP7.14□□□□□ -1.27
BRCA1-214ENST00000477152 PDK1Q15118 436 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 SLC14A2Q15849 920 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 HENMT1Q5T8I9 393 aaKnown RBP7.14□□□□□ -1.27
BRCA1-214ENST00000477152 ALKBH5Q6P6C2 394 aaKnown RBP7.14□□□□□ -1.27
BRCA1-214ENST00000477152 ZNF227Q86WZ6 799 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 VSIG1Q86XK7 387 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 PTRH1Q86Y79 214 aaKnown RBP7.14□□□□□ -1.27
BRCA1-214ENST00000477152 SFTPA2Q8IWL1 248 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 BMPERQ8N8U9 685 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 TEX19Q8NA77 164 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 HTR3CQ8WXA8 447 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms