RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 UBDO15205 165 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 SCO1O75880 301 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 CCNKO75909 580 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 CDK14O94921 469 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 SIX3O95343 332 aaPredicted RBP8.27□□□□□ -1.08
VAPB-205ENST00000476395 SNRPB2P08579 225 aaKnown RBP8.27□□□□□ -1.08
VAPB-205ENST00000476395 HAPLN1P10915 354 aaPredicted RBP8.27□□□□□ -1.08
VAPB-205ENST00000476395 CD1DP15813 335 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 CTAG1AP78358 180 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 VAC14Q08AM6 782 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 FAPQ12884 760 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 EPS8Q12929 822 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 GPR158Q5T848 1215 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 HECTD2Q5U5R9 776 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 BROXQ5VW32 411 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 AGMOQ6ZNB7 445 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 GALNT7Q86SF2 657 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 LINC00523Q86TU6 105 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 LYSMD2Q8IV50 215 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 GOLM1Q8NBJ4 401 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 GPRC5AQ8NFJ5 357 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 IMP4Q96G21 291 aaKnown RBP8.27□□□□□ -1.08
VAPB-205ENST00000476395 CENPNQ96H22 339 aaPredicted RBP8.27□□□□□ -1.08
VAPB-205ENST00000476395 FERD3LQ96RJ6 166 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 TOR3AQ9H497 397 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 ZNF639Q9UID6 485 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 FBXO10Q9UK96 956 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 HS3ST4Q9Y661 456 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 A0A0X1KG70 313 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 UPK1AO00322 258 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 CDK2AP1O14519 115 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 KCNJ13O60928 360 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 ZNF865P0CJ78 1059 aaPredicted RBP8.27□□□□□ -1.09
VAPB-205ENST00000476395 ATP4BP51164 291 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 GPLD1P80108 840 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 SAMD4BQ5PRF9 694 aaKnown RBP8.27□□□□□ -1.09
VAPB-205ENST00000476395 KANK2Q63ZY3 851 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 SFRP1Q8N474 314 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 ARRDC2Q8TBH0 407 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 VPS33AQ96AX1 596 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 ISG20Q96AZ6 181 aaKnown RBP8.27□□□□□ -1.09
VAPB-205ENST00000476395 MAP6Q96JE9 813 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 ZFYVE19Q96K21 471 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 PTPN18Q99952 460 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 TINF2Q9BSI4 451 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 C9orf16Q9BUW7 83 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 BEX2Q9BXY8 128 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 SP110Q9HB58 689 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 HPS4Q9NQG7 708 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 ASB1Q9Y576 335 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 RRN3P2A6NIE6 340 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 PMPCBO75439 489 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 ALOX5P09917 674 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 FDXRP22570 491 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 PSMA4P25789 261 aaKnown RBP8.27□□□□□ -1.09
VAPB-205ENST00000476395 IFNA8P32881 189 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 SUOXP51687 545 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 ACVR1Q04771 509 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 CCDC103Q8IW40 242 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 PDPRQ8NCN5 879 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 TXNDC15Q96J42 360 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 MED10Q9BTT4 135 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 WDR12Q9GZL7 423 aaKnown RBP8.27□□□□□ -1.09
VAPB-205ENST00000476395 PRDM5Q9NQX1 630 aaPredicted RBP8.27□□□□□ -1.09
VAPB-205ENST00000476395 MID2Q9UJV3 735 aa8.27□□□□□ -1.09
VAPB-205ENST00000476395 AAR2Q9Y312 384 aaKnown RBP8.27□□□□□ -1.09
VAPB-205ENST00000476395 OAS3Q9Y6K5 1087 aaKnown RBP8.27□□□□□ -1.09
VAPB-205ENST00000476395 ACSL4O60488 711 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 SLC4A1P02730 911 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 LTA4HP09960 611 aaKnown RBP8.26□□□□□ -1.09
VAPB-205ENST00000476395 HRH2P25021 359 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 DNAJB2P25686 324 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 PRDX3P30048 256 aaKnown RBP8.26□□□□□ -1.09
VAPB-205ENST00000476395 BLVRAP53004 296 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 CDH13P55290 713 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 P2RX3P56373 397 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 WNT3AP56704 352 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 MAXP61244 160 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 MFSD10Q14728 455 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 AAK1Q2M2I8 961 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 ATAD3CQ5T2N8 411 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 ADCK1Q86TW2 530 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 SLAIN1Q8ND83 568 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 OR7A2PQ8NGA2 310 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 CNIH3Q8TBE1 160 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 MYRFLQ96LU7 910 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 PSKH2Q96QS6 385 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 ATOH8Q96SQ7 321 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 GAD1Q99259 594 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 TMEM246Q9BRR3 403 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 PRRG3Q9BZD7 231 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 ALG9Q9H6U8 611 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 NTN4Q9HB63 628 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 RRAGCQ9HB90 399 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 DSEQ9UL01 958 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 PTCH2Q9Y6C5 1203 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 SCN8AQ9UQD0 1980 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 A0A0G2JMP0 313 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 M0R3G1 203 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 PDHXO00330 501 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms