RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 TMBIM1Q969X1 311 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 UTP4Q969X6 686 aaKnown RBP3.81□□□□□ -1.8
LSM2-211ENST00000475835 FUBP1Q96AE4 644 aaKnown RBP3.81□□□□□ -1.8
LSM2-211ENST00000475835 C18orf25Q96B23 403 aaPredicted RBP3.81□□□□□ -1.8
LSM2-211ENST00000475835 EXOSC8Q96B26 276 aaKnown RBP3.81□□□□□ -1.8
LSM2-211ENST00000475835 S100PBPQ96BU1 408 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 TLCD1Q96CP7 247 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 PDLIM5Q96HC4 596 aaKnown RBP3.81□□□□□ -1.8
LSM2-211ENST00000475835 LRIG1Q96JA1 1093 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 PPP1R36Q96LQ0 422 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 APOLD1Q96LR9 279 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 C10orf90Q96M02 699 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 CYP2S1Q96SQ9 504 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 INTS14Q96SY0 518 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 UHRF1Q96T88 793 aaPredicted RBP3.81□□□□□ -1.8
LSM2-211ENST00000475835 SERPINI1Q99574 410 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 CDCA3Q99618 268 aaPredicted RBP3.81□□□□□ -1.8
LSM2-211ENST00000475835 APOL2Q9BQE5 337 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 ACBD6Q9BR61 282 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 TMEM246Q9BRR3 403 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 COPS4Q9BT78 406 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 PTDSS2Q9BVG9 487 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 POTEKPQ9BYX7 375 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 TOLLIPQ9H0E2 274 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 SPNS1Q9H2V7 528 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 C12orf65Q9H3J6 166 aaKnown RBP3.81□□□□□ -1.8
LSM2-211ENST00000475835 BOLA2Q9H3K6 86 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 SEMA6BQ9H3T3 888 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 SMYD3Q9H7B4 428 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 BRF2Q9HAW0 419 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 VAT1LQ9HCJ6 419 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 NANSQ9NR45 359 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 KRT84Q9NSB2 600 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 ABCC13Q9NSE7 274 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 LRRC4BQ9NT99 713 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 RNF146Q9NTX7 359 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 TBC1D13Q9NVG8 400 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 FAM86C1Q9NVL1 165 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 TREM2Q9NZC2 230 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 TRPC4Q9UBN4 977 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 RNF14Q9UBS8 474 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 GGT7Q9UJ14 662 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 MAGEL2Q9UJ55 1249 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 ENPP5Q9UJA9 477 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 ZNF229Q9UJW7 825 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 ANAPC2Q9UJX6 822 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 RAB26Q9ULW5 256 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 PTPN22Q9Y2R2 807 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.81□□□□□ -1.8
LSM2-211ENST00000475835 AAR2Q9Y312 384 aaKnown RBP3.81□□□□□ -1.8
LSM2-211ENST00000475835 SAR1BQ9Y6B6 198 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 SPACA6W5XKT8 324 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 LMTK3Q96Q04 1460 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 PNPLA7Q6ZV29 1317 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 KIF13BQ9NQT8 1826 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 A0A075B6Q4 140 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 A0A0A6YYH2 397 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 A0A1W2PPQ1 181 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 A0A1W2PRB8 838 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 DENND3A2RUS2 1198 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 GSAPA4D1B5 854 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 FAM86C2PA6NEL3 165 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 C2orf71A6NGG8 1288 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 MOXD2PA6NHM9 499 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 ANKDD1BA6NHY2 528 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 A6NJ64 397 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 GSG1L2A8MUP6 293 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 CLDN25C9JDP6 229 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 H0YAE9 185 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 KCNK1O00180 336 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 GRM8O00222 908 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 CTDSP2O14595 271 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 ZNF213O14771 459 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 TCAPO15273 167 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 SLC16A6O15403 523 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 DYNC1LI2O43237 492 aaPredicted RBP3.8□□□□□ -1.8
LSM2-211ENST00000475835 KCNAB3O43448 404 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 VEGFDO43915 354 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 UGT1A9O60656 530 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 PPP6R2O75170 966 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 H2AFYO75367 372 aaKnown RBP3.8□□□□□ -1.8
LSM2-211ENST00000475835 BANF1O75531 89 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 STX11O75558 287 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 MED6O75586 246 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 RFPL3O75679 317 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 RHBDL1O75783 438 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 CIB2O75838 187 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 BCAS2O75934 225 aaPredicted RBP3.8□□□□□ -1.8
LSM2-211ENST00000475835 SORBS2O94875 1100 aaKnown RBP3.8□□□□□ -1.8
LSM2-211ENST00000475835 CAMTA2O94983 1202 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 KAT7O95251 611 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 DIRAS3O95661 229 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 PEX11BO96011 259 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 GOT2P00505 430 aaKnown RBP3.8□□□□□ -1.8
LSM2-211ENST00000475835 AGTP01019 485 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 EPOP01588 193 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 CHRM5P08912 532 aaPredicted RBP3.8□□□□□ -1.8
LSM2-211ENST00000475835 CTXN2P0C2S0 81 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 FAM86B2P0C5J1 330 aa3.8□□□□□ -1.8
LSM2-211ENST00000475835 H2AFB1P0C5Y9 115 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms