RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 TRPM3Q9HCF6 1732 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 UTYO14607 1347 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 ASTN2O75129 1339 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 SF3B1O75533 1304 aaKnown RBP eCLIP5.91□□□□□ -1.468e-6■■■■■ 107
ECHDC1-215ENST00000475319 UBE4BO95155 1302 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 SAGE2PA6NJ88 616 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 ZNF729A6NN14 1252 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 ZNF879B4DU55 563 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 C22orf46C9J442 243 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 H3BS24 57 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 J3KRW8 73 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 EEF2KO00418 725 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 SH2B2O14492 632 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 ATP2A1O14983 1001 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 TEX33O43247 280 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 B3GALT2O43825 422 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 CBR3O75828 277 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 CCNE2O96020 404 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 GOT2P00505 430 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 POMCP01189 267 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 CRYABP02511 175 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 UGT2B4P06133 528 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 LPLP06858 475 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 RBP1P09455 135 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 SAGP10523 405 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 COX5BP10606 129 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 HSPD1P10809 573 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 PRPS2P11908 318 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 FDPSP14324 419 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 PSMC3P17980 439 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 DDCP20711 480 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 MMP8P22894 467 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 MAT2AP31153 395 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 HOXA7P31268 230 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 UQCRC1P31930 480 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 GJC1P36383 396 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 CCT3P49368 545 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 SLC26A5P58743 744 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 TAS2R60P59551 318 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 RNASE9P60153 205 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 TXNL4AP83876 142 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 ZNF33AQ06730 810 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 PUDPQ08623 228 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 FADDQ13158 208 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 SCARB2Q14108 478 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 RRP1BQ14684 758 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 ZNF169Q14929 603 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 VEPH1Q14D04 833 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 PON3Q15166 354 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 PTPRRQ15256 657 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 ZMYND11Q15326 602 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 GAB4Q2WGN9 574 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 PGS1Q32NB8 556 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 HSF5Q4G112 596 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 GALNT18Q6P9A2 607 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 DCUN1D2Q6PH85 259 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 DARS2Q6PI48 645 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 BHLHB9Q6PI77 547 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 KIAA0408Q6ZU52 694 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 LINC00523Q86TU6 105 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 LIX1LQ8IVB5 337 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 NUDCD3Q8IVD9 361 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 GPALPP1Q8IXQ4 340 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 TIGD4Q8IY51 512 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 KIAA0319LQ8IZA0 1049 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 PDIK1LQ8N165 341 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 SIX6OS1Q8N1H7 587 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 PYROXD2Q8N2H3 581 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 CCDC185Q8N715 623 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 FAM71DQ8N9W8 422 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 KDM1BQ8NB78 822 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 FBXO15Q8NCQ5 510 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 DENND6BQ8NEG7 585 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 GPR156Q8NFN8 814 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 PNPT1Q8TCS8 783 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 PYDC1Q8WXC3 89 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 ASB12Q8WXK4 309 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 GTF2H4Q92759 462 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 RILPL2Q969X0 211 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 NTAN1Q96AB6 310 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 DCUN1D1Q96GG9 259 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 NSMCE2Q96MF7 247 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 EIF2AK1Q9BQI3 630 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 DBNDD2Q9BQY9 259 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 NUDT16L1Q9BRJ7 211 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 ADPGKQ9BRR6 497 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 TBCDQ9BTW9 1192 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 CRB3Q9BUF7 120 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 C1orf21Q9H246 121 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 SAV1Q9H4B6 383 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 RANBP3Q9H6Z4 567 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 LRRC40Q9H9A6 602 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 UNKLQ9H9P5 680 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 TRMT13Q9NUP7 481 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 DNAJC11Q9NVH1 559 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 GDE1Q9NZC3 331 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 USP36Q9P275 1121 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 ABCD2Q9UBJ2 740 aa5.91□□□□□ -1.46
ECHDC1-215ENST00000475319 EBF1Q9UH73 591 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms