RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 OR52Z1P0C646 297 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 UMPSP11172 480 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 ACADMP11310 421 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 PRG2P13727 222 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 CD36P16671 472 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 ADRA1DP25100 572 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 SSTR3P32745 418 aaPredicted RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 DPP6P42658 865 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 MECP2P51608 486 aaKnown RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 MAPK12P53778 367 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 STX17P56962 302 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 ERVK-8P63133 956 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 SOX4Q06945 474 aaPredicted RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 HYAL2Q12891 473 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 BFSP1Q12934 665 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 CELF3Q5SZQ8 465 aaKnown RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 MPP7Q5T2T1 576 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 ZBTB37Q5TC79 503 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 USP53Q70EK8 1073 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 TRMT10CQ7L0Y3 403 aaKnown RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 KCNMB4Q86W47 210 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 APOBEC3FQ8IUX4 373 aaKnown RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 C12orf29Q8N999 325 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 FIG4Q92562 907 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 LRIG1Q96JA1 1093 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 C5orf34Q96MH7 638 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 GCNAQ96QF7 691 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 TGS1Q96RS0 853 aaKnown RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 MRPL13Q9BYD1 178 aaKnown RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 EBF3Q9H4W6 596 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 FAM217BQ9NTX9 383 aaPredicted RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 POT1Q9NUX5 634 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 CLEC5AQ9NY25 188 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 APPL1Q9UKG1 709 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 RUVBL2Q9Y230 463 aaKnown RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 KLK4Q9Y5K2 254 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 CLCA3PQ9Y6N3 262 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 ZNF541Q9H0D2 1346 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 DDX60LQ5H9U9 1706 aaKnown RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 OR6C70A6NIJ9 312 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 PRKAB2O43741 272 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 ITGA10O75578 1167 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 ATE1O95260 518 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 STAG3L3P0CL85 134 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 NT5EP21589 574 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 ARL1P40616 181 aaPredicted RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 SLC1A3P43003 542 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 CASP5P51878 434 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 RPL10AP62906 217 aaKnown RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 SRSF11Q05519 484 aaKnown RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 SLC12A1Q13621 1099 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 ATP1A4Q13733 1029 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 C16orf72Q14CZ0 275 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 STX1AQ16623 288 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 ZNF569Q5MCW4 686 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 MARC1Q5VT66 337 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 BRAT1Q6PJG6 821 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 LRRC74BQ6ZQY2 392 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 WDR5BQ86VZ2 330 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 PDSS2Q86YH6 399 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 FITM2Q8N6M3 262 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 OR8J1Q8NGP2 316 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 OR6F1Q8NGZ6 308 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 SPPL2AQ8TCT8 520 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 C10orf90Q96M02 699 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 SIGLEC11Q96RL6 698 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 LBHD1Q9BQE6 289 aaPredicted RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 SMYD3Q9H7B4 428 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 TMBIM4Q9HC24 238 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 TLR8Q9NR97 1041 aaKnown RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 C19orf12Q9NSK7 152 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 EVA1BQ9NVM1 165 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 INTS13Q9NVM9 706 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 COX16Q9P0S2 106 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 GGT7Q9UJ14 662 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 FZD10Q9ULW2 581 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 NDRG2Q9UN36 371 aaKnown RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 ASB4Q9Y574 426 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 HRH3Q9Y5N1 445 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 UBE4BO95155 1302 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 FRMPD2Q68DX3 1309 aaPredicted RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 A0A0U1RQS6 177 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 KCNK2O95069 426 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 UNC5CO95185 931 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 ZNF888P0CJ79 500 aaPredicted RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 THRAP10827 490 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 KRT5P13647 590 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 NR1D1P20393 614 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 EFNA1P20827 205 aaPredicted RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 MAT2AP31153 395 aaKnown RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 FLI1Q01543 452 aaPredicted RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 CKAP4Q07065 602 aaKnown RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 TSPAN31Q12999 210 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 SOWAHAQ2M3V2 549 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 COL13A1Q5TAT6 717 aaPredicted RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 SLC9A4Q6AI14 798 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 RFWD3Q6PCD5 774 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 ZBTB46Q86UZ6 589 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 ANKRD46Q86W74 232 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 PIWIL2Q8TC59 973 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms