RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 EPHA4P54764 986 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 RPE65Q16518 533 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 HSP90AA5PQ58FG0 334 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 ZNF789Q5FWF6 425 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 TEDDM1Q5T9Z0 273 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 ZNF470Q6ECI4 717 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 DHRS13Q6UX07 377 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 SLC9B2Q86UD5 537 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 DENND6AQ8IWF6 608 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 CFAP206Q8IYR0 622 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 LILRA3Q8N6C8 439 aaPredicted RBP16.58■□□□□ 0.24
SCAF11-206ENST00000474828 SH3KBP1Q96B97 665 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 MCMBPQ9BTE3 642 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 TWSG1Q9GZX9 223 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 OSGEPL1Q9H4B0 414 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 SLC40A1Q9NP59 571 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 IL1RAPL1Q9NZN1 696 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 GNPTGQ9UJJ9 305 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 MED16Q9Y2X0 877 aa16.58■□□□□ 0.24
SCAF11-206ENST00000474828 ESYT3A0FGR9 886 aa16.57■□□□□ 0.24
SCAF11-206ENST00000474828 LILRA5A6NI73 299 aa16.57■□□□□ 0.24
SCAF11-206ENST00000474828 SNX2O60749 519 aa16.57■□□□□ 0.24
SCAF11-206ENST00000474828 SLCO2B1O94956 709 aa16.57■□□□□ 0.24
SCAF11-206ENST00000474828 CD9P21926 228 aa16.57■□□□□ 0.24
SCAF11-206ENST00000474828 RPL10P27635 214 aaKnown RBP16.57■□□□□ 0.24
SCAF11-206ENST00000474828 ACADLP28330 430 aa16.57■□□□□ 0.24
SCAF11-206ENST00000474828 GABRB3P28472 473 aa16.57■□□□□ 0.24
SCAF11-206ENST00000474828 CCR7P32248 378 aa16.57■□□□□ 0.24
SCAF11-206ENST00000474828 HHEXQ03014 270 aa16.57■□□□□ 0.24
SCAF11-206ENST00000474828 THOC5Q13769 683 aaKnown RBP16.57■□□□□ 0.24
SCAF11-206ENST00000474828 TRMT10BQ6PF06 316 aaKnown RBP16.57■□□□□ 0.24
SCAF11-206ENST00000474828 ZBED8Q8IZ13 594 aa16.57■□□□□ 0.24
SCAF11-206ENST00000474828 GALNT15Q8N3T1 639 aa16.57■□□□□ 0.24
SCAF11-206ENST00000474828 GSDMBQ8TAX9 411 aa16.57■□□□□ 0.24
SCAF11-206ENST00000474828 LKAAEAR1Q8TD35 194 aa16.57■□□□□ 0.24
SCAF11-206ENST00000474828 GRAMD1AQ96CP6 724 aa16.57■□□□□ 0.24
SCAF11-206ENST00000474828 RMDN2Q96LZ7 410 aa16.57■□□□□ 0.24
SCAF11-206ENST00000474828 INSM2Q96T92 566 aaPredicted RBP16.57■□□□□ 0.24
SCAF11-206ENST00000474828 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.57■□□□□ 0.24
SCAF11-206ENST00000474828 EPB41L1Q9H4G0 881 aa16.57■□□□□ 0.24
SCAF11-206ENST00000474828 PDP2Q9P2J9 529 aa16.57■□□□□ 0.24
SCAF11-206ENST00000474828 NEUROG3Q9Y4Z2 214 aa16.57■□□□□ 0.24
SCAF11-206ENST00000474828 COMMD10Q9Y6G5 202 aa16.57■□□□□ 0.24
SCAF11-206ENST00000474828 IGHV1OR21-1A0A087WYE8 117 aa16.56■□□□□ 0.24
SCAF11-206ENST00000474828 OR52A4PA6NMU1 304 aa16.56■□□□□ 0.24
SCAF11-206ENST00000474828 PDZK1P1A8MUH7 402 aa16.56■□□□□ 0.24
SCAF11-206ENST00000474828 KPNA5O15131 536 aa16.56■□□□□ 0.24
SCAF11-206ENST00000474828 ERVK-10P10266 1014 aa16.56■□□□□ 0.24
SCAF11-206ENST00000474828 MTHFD1P11586 935 aaKnown RBP16.56■□□□□ 0.24
SCAF11-206ENST00000474828 PKMP14618 531 aaKnown RBP16.56■□□□□ 0.24
SCAF11-206ENST00000474828 CD1CP29017 333 aa16.56■□□□□ 0.24
SCAF11-206ENST00000474828 PDHA2P29803 388 aa16.56■□□□□ 0.24
SCAF11-206ENST00000474828 HALP42357 657 aa16.56■□□□□ 0.24
SCAF11-206ENST00000474828 GPLD1P80108 840 aa16.56■□□□□ 0.24
SCAF11-206ENST00000474828 CTBP1Q13363 440 aa16.56■□□□□ 0.24
SCAF11-206ENST00000474828 ZNF549Q6P9A3 640 aa16.56■□□□□ 0.24
SCAF11-206ENST00000474828 TMEM26Q6ZUK4 368 aa16.56■□□□□ 0.24
SCAF11-206ENST00000474828 PDZD3Q86UT5 571 aa16.56■□□□□ 0.24
SCAF11-206ENST00000474828 ANKMY2Q8IV38 441 aa16.56■□□□□ 0.24
SCAF11-206ENST00000474828 SLC22A15Q8IZD6 547 aa16.56■□□□□ 0.24
SCAF11-206ENST00000474828 CHCHD4Q8N4Q1 142 aa16.56■□□□□ 0.24
SCAF11-206ENST00000474828 EIF1ADQ8N9N8 165 aaKnown RBP16.56■□□□□ 0.24
SCAF11-206ENST00000474828 GABPB2Q8TAK5 448 aaPredicted RBP16.56■□□□□ 0.24
SCAF11-206ENST00000474828 PYROXD1Q8WU10 500 aa16.56■□□□□ 0.24
SCAF11-206ENST00000474828 ASZ1Q8WWH4 475 aa16.56■□□□□ 0.24
SCAF11-206ENST00000474828 PANX3Q96QZ0 392 aa16.56■□□□□ 0.24
SCAF11-206ENST00000474828 TSSK1BQ9BXA7 367 aa16.56■□□□□ 0.24
SCAF11-206ENST00000474828 TSPYL1Q9H0U9 437 aa16.56■□□□□ 0.24
SCAF11-206ENST00000474828 LRRN3Q9H3W5 708 aa16.56■□□□□ 0.24
SCAF11-206ENST00000474828 PIKFYVEQ9Y2I7 2098 aa16.55■□□□□ 0.24
SCAF11-206ENST00000474828 RHPN2P1A8MT19 583 aa16.55■□□□□ 0.24
SCAF11-206ENST00000474828 CASC3O15234 703 aaKnown RBP16.55■□□□□ 0.24
SCAF11-206ENST00000474828 ZW10O43264 779 aa16.55■□□□□ 0.24
SCAF11-206ENST00000474828 AHSGP02765 367 aa16.55■□□□□ 0.24
SCAF11-206ENST00000474828 ATP5DP30049 168 aa16.55■□□□□ 0.24
SCAF11-206ENST00000474828 MAGEA4P43358 317 aa16.55■□□□□ 0.24
SCAF11-206ENST00000474828 PDX1P52945 283 aa16.55■□□□□ 0.24
SCAF11-206ENST00000474828 GPX6P59796 221 aa16.55■□□□□ 0.24
SCAF11-206ENST00000474828 CCL7P80098 99 aa16.55■□□□□ 0.24
SCAF11-206ENST00000474828 CAMK2BQ13554 666 aa16.55■□□□□ 0.24
SCAF11-206ENST00000474828 CUL1Q13616 776 aa16.55■□□□□ 0.24
SCAF11-206ENST00000474828 HP1BP3Q5SSJ5 553 aaPredicted RBP16.55■□□□□ 0.24
SCAF11-206ENST00000474828 PLEKHS1Q5SXH7 462 aa16.55■□□□□ 0.24
SCAF11-206ENST00000474828 CCNI2Q6ZMN8 369 aaPredicted RBP16.55■□□□□ 0.24
SCAF11-206ENST00000474828 LRRN4CLQ8ND94 238 aa16.55■□□□□ 0.24
SCAF11-206ENST00000474828 SPDYE1Q8NFV5 336 aaPredicted RBP16.55■□□□□ 0.24
SCAF11-206ENST00000474828 KCNJ9Q92806 393 aa16.55■□□□□ 0.24
SCAF11-206ENST00000474828 FUT8Q9BYC5 575 aa16.55■□□□□ 0.24
SCAF11-206ENST00000474828 WWP1Q9H0M0 922 aa16.55■□□□□ 0.24
SCAF11-206ENST00000474828 STN1Q9H668 368 aaKnown RBP16.55■□□□□ 0.24
SCAF11-206ENST00000474828 SAYSD1Q9NPB0 183 aa16.55■□□□□ 0.24
SCAF11-206ENST00000474828 IARS2Q9NSE4 1012 aaKnown RBP16.55■□□□□ 0.24
SCAF11-206ENST00000474828 CORO1CQ9ULV4 474 aaPredicted RBP16.55■□□□□ 0.24
SCAF11-206ENST00000474828 RP1P56715 2156 aa16.55■□□□□ 0.24
SCAF11-206ENST00000474828 PTPRBP23467 1997 aa16.55■□□□□ 0.24
SCAF11-206ENST00000474828 IQCF5A8MTL0 148 aa16.54■□□□□ 0.24
SCAF11-206ENST00000474828 D6RAR5 112 aa16.54■□□□□ 0.24
SCAF11-206ENST00000474828 HAUS5O94927 633 aa16.54■□□□□ 0.24
SCAF11-206ENST00000474828 SLC35G4P0C7Q5 338 aa16.54■□□□□ 0.24
SCAF11-206ENST00000474828 NDUFS1P28331 727 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms