RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 AP4S1Q9Y587 144 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 MRPL42Q9Y6G3 142 aaKnown RBP4.56□□□□□ -1.68
CCNL1-215ENST00000474539 DGKBQ9Y6T7 804 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 BTAF1O14981 1849 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 NCF1BA6NI72 391 aaPredicted RBP4.56□□□□□ -1.68
CCNL1-215ENST00000474539 NCF1CA8MVU1 366 aaPredicted RBP4.56□□□□□ -1.68
CCNL1-215ENST00000474539 B4DGG1 531 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 FOXE1O00358 373 aaPredicted RBP4.56□□□□□ -1.68
CCNL1-215ENST00000474539 GPR32O75388 356 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 TIPRLO75663 272 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 TCEA3O75764 348 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 S1PR4O95977 384 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 UROSP10746 265 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 ATP1B2P14415 290 aaPredicted RBP4.56□□□□□ -1.68
CCNL1-215ENST00000474539 NCF1P14598 390 aaPredicted RBP4.56□□□□□ -1.68
CCNL1-215ENST00000474539 TFEBP19484 476 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 FASP25445 335 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 ASPAP45381 313 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 GABRB2P47870 512 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 SLC1A6P48664 564 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 MAPK12P53778 367 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 RAB15P59190 212 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 CRYMQ14894 314 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 MFSD13AQ14CX5 517 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 MAPKAPK3Q16644 382 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 PTPN20Q4JDL3 420 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 PKDCCQ504Y2 493 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 ARSIQ5FYB1 569 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 TMEM31Q5JXX7 168 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 PRAMEF14Q5SWL7 426 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 PRAMEF13Q5VWM6 474 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 TLDC1Q6P9B6 456 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 C3P1Q6ZMU1 363 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 LRRC74BQ6ZQY2 392 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 HTR3DQ70Z44 454 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 OR4K2Q8NGD2 314 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 OR52K1Q8NGK4 314 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 RHBDD1Q8TEB9 315 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 MR1Q95460 341 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 HDAC10Q969S8 669 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 EME1Q96AY2 570 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 LRRC1Q9BTT6 524 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 G6PC3Q9BUM1 346 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 C9orf16Q9BUW7 83 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 UBR2Q8IWV8 1755 aa4.56□□□□□ -1.68
CCNL1-215ENST00000474539 CENPXA8MT69 81 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 ADAMTS4O75173 837 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 CNMDO75829 334 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 SEC31AO94979 1220 aaKnown RBP4.55□□□□□ -1.68
CCNL1-215ENST00000474539 SNX4O95219 450 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 CCDC166P0CW27 439 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 CD44P16070 742 aaKnown RBP4.55□□□□□ -1.68
CCNL1-215ENST00000474539 SLC6A2P23975 617 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 ALDH4A1P30038 563 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 CCNHP51946 323 aaPredicted RBP4.55□□□□□ -1.68
CCNL1-215ENST00000474539 UCNP55089 124 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 OC90Q02509 493 aaPredicted RBP4.55□□□□□ -1.68
CCNL1-215ENST00000474539 CREB5Q02930 508 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 RIPPLY1Q0D2K3 151 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 RALGDSQ12967 914 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 RCAN2Q14206 197 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 CNGA3Q16281 694 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 C15orf59Q2T9L4 293 aaPredicted RBP4.55□□□□□ -1.68
CCNL1-215ENST00000474539 MINDY4Q4G0A6 757 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 ARSHQ5FYA8 562 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 FNBP1LQ5T0N5 605 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 METTL21CQ5VZV1 264 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 EIF3MQ7L2H7 374 aaKnown RBP4.55□□□□□ -1.68
CCNL1-215ENST00000474539 KCNK18Q7Z418 384 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 TMPRSS6Q8IU80 811 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 PLD3Q8IV08 490 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 UMODL1-AS1Q8N2C9 162 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 RANBP9Q96S59 729 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 KCTD15Q96SI1 283 aaPredicted RBP4.55□□□□□ -1.68
CCNL1-215ENST00000474539 FNDC11Q9BVV2 318 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 CDC42EP4Q9H3Q1 356 aaKnown RBP4.55□□□□□ -1.68
CCNL1-215ENST00000474539 LDAHQ9H6V9 325 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 SAR1AQ9NR31 198 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 ATXN10Q9UBB4 475 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 MAGEL2Q9UJ55 1249 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 DCTN4Q9UJW0 460 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 CA14Q9ULX7 337 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 SLC6A14Q9UN76 642 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 CHKBQ9Y259 395 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 INVSQ9Y283 1065 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 SPEF1Q9Y4P9 236 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 PCDHGB2Q9Y5G2 931 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 HS3ST3A1Q9Y663 406 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 FTCDNL1E5RQL4 147 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 NPHS1O60500 1241 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 FARS2O95363 451 aaKnown RBP4.55□□□□□ -1.68
CCNL1-215ENST00000474539 OR4Q2P0C623 313 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 SRFP11831 508 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 CTPS1P17812 591 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 FBLP22087 321 aaKnown RBP4.55□□□□□ -1.68
CCNL1-215ENST00000474539 ITGB7P26010 798 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 ITPKBP27987 946 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 WASP42768 502 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 MAGEA8P43361 318 aa4.55□□□□□ -1.68
CCNL1-215ENST00000474539 GTF2A1P52655 376 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms